Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS22460 and BPHYT_RS22465 are separated by 291 nucleotides BPHYT_RS22465 and BPHYT_RS22470 overlap by 4 nucleotides BPHYT_RS22470 and BPHYT_RS22475 are separated by 169 nucleotides
BPHYT_RS22460: BPHYT_RS22460 - phosphonate ABC transporter ATP-binidng protein, at 594,255 to 595,160
_RS22460
BPHYT_RS22465: BPHYT_RS22465 - zinc carboxypeptidase-like protein, at 595,452 to 596,486
_RS22465
BPHYT_RS22470: BPHYT_RS22470 - hydrolase, at 596,483 to 597,283
_RS22470
BPHYT_RS22475: BPHYT_RS22475 - NAD-glutamate dehydrogenase, at 597,453 to 602,294
_RS22475
Position (kb) 595
596
597 Strain fitness (log2 ratio) -1
0
1
2
3 at 595.165 kb on - strand at 595.268 kb on - strand at 595.268 kb on - strand at 595.393 kb on + strand at 595.838 kb on + strand, within BPHYT_RS22465 at 596.145 kb on + strand, within BPHYT_RS22465 at 596.172 kb on + strand, within BPHYT_RS22465 at 596.176 kb on + strand, within BPHYT_RS22465 at 596.467 kb on - strand at 596.468 kb on + strand at 596.482 kb on + strand at 596.816 kb on - strand, within BPHYT_RS22470 at 597.325 kb on + strand at 597.371 kb on + strand at 597.371 kb on + strand at 597.372 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 595,165 - -0.0 595,268 - -1.0 595,268 - -1.3 595,393 + -0.0 595,838 + BPHYT_RS22465 0.37 -0.7 596,145 + BPHYT_RS22465 0.67 +0.5 596,172 + BPHYT_RS22465 0.70 +0.8 596,176 + BPHYT_RS22465 0.70 +2.0 596,467 - +2.5 596,468 + +0.9 596,482 + +1.3 596,816 - BPHYT_RS22470 0.42 -0.5 597,325 + +3.4 597,371 + -0.2 597,371 + +0.0 597,372 - +0.7
Or see this region's nucleotide sequence