Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21245 and BPHYT_RS21250 are separated by 239 nucleotides BPHYT_RS21250 and BPHYT_RS21255 are separated by 88 nucleotides
BPHYT_RS21245: BPHYT_RS21245 - gluconolactonase, at 327,147 to 328,088
_RS21245
BPHYT_RS21250: BPHYT_RS21250 - ABC transporter substrate-binding protein, at 328,328 to 329,497
_RS21250
BPHYT_RS21255: BPHYT_RS21255 - spermidine/putrescine ABC transporter ATP-binding protein, at 329,586 to 330,665
_RS21255
Position (kb) 328
329
330 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 327.402 kb on - strand, within BPHYT_RS21245 at 327.468 kb on + strand, within BPHYT_RS21245 at 327.598 kb on - strand, within BPHYT_RS21245 at 327.736 kb on - strand, within BPHYT_RS21245 at 327.736 kb on - strand, within BPHYT_RS21245 at 327.736 kb on - strand, within BPHYT_RS21245 at 327.736 kb on - strand, within BPHYT_RS21245 at 327.935 kb on + strand, within BPHYT_RS21245 at 327.936 kb on - strand, within BPHYT_RS21245 at 327.936 kb on - strand, within BPHYT_RS21245 at 328.047 kb on + strand at 328.056 kb on + strand at 328.264 kb on - strand at 328.264 kb on - strand at 328.266 kb on + strand at 328.267 kb on - strand at 328.369 kb on - strand at 328.369 kb on - strand at 328.703 kb on + strand, within BPHYT_RS21250 at 328.765 kb on + strand, within BPHYT_RS21250 at 328.791 kb on - strand, within BPHYT_RS21250 at 328.791 kb on - strand, within BPHYT_RS21250 at 329.851 kb on + strand, within BPHYT_RS21255 at 329.862 kb on + strand, within BPHYT_RS21255 at 330.177 kb on + strand, within BPHYT_RS21255 at 330.276 kb on + strand, within BPHYT_RS21255 at 330.276 kb on + strand, within BPHYT_RS21255 at 330.458 kb on + strand, within BPHYT_RS21255
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 327,402 - BPHYT_RS21245 0.27 -1.3 327,468 + BPHYT_RS21245 0.34 +0.6 327,598 - BPHYT_RS21245 0.48 -1.3 327,736 - BPHYT_RS21245 0.63 +0.9 327,736 - BPHYT_RS21245 0.63 +0.4 327,736 - BPHYT_RS21245 0.63 -0.3 327,736 - BPHYT_RS21245 0.63 -1.7 327,935 + BPHYT_RS21245 0.84 -1.5 327,936 - BPHYT_RS21245 0.84 -1.3 327,936 - BPHYT_RS21245 0.84 -3.3 328,047 + -1.6 328,056 + -0.7 328,264 - -0.1 328,264 - +0.3 328,266 + -0.3 328,267 - +0.7 328,369 - +0.2 328,369 - -2.2 328,703 + BPHYT_RS21250 0.32 +0.0 328,765 + BPHYT_RS21250 0.37 +0.6 328,791 - BPHYT_RS21250 0.40 -0.9 328,791 - BPHYT_RS21250 0.40 +0.2 329,851 + BPHYT_RS21255 0.25 -0.4 329,862 + BPHYT_RS21255 0.26 +0.5 330,177 + BPHYT_RS21255 0.55 +2.7 330,276 + BPHYT_RS21255 0.64 +0.5 330,276 + BPHYT_RS21255 0.64 +0.5 330,458 + BPHYT_RS21255 0.81 +0.7
Or see this region's nucleotide sequence