Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20910 and BPHYT_RS20915 are separated by 24 nucleotides BPHYT_RS20915 and BPHYT_RS20920 are separated by 11 nucleotides BPHYT_RS20920 and BPHYT_RS20925 are separated by 400 nucleotides
BPHYT_RS20910: BPHYT_RS20910 - oxidoreductase, at 252,165 to 254,402
_RS20910
BPHYT_RS20915: BPHYT_RS20915 - hypothetical protein, at 254,427 to 255,434
_RS20915
BPHYT_RS20920: BPHYT_RS20920 - oxidoreductase, at 255,446 to 255,991
_RS20920
BPHYT_RS20925: BPHYT_RS20925 - dimethylallyltransferase, at 256,392 to 257,069
_RS20925
Position (kb) 254
255
256 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 253.498 kb on + strand, within BPHYT_RS20910 at 253.872 kb on + strand, within BPHYT_RS20910 at 253.873 kb on - strand, within BPHYT_RS20910 at 253.876 kb on + strand, within BPHYT_RS20910 at 253.877 kb on - strand, within BPHYT_RS20910 at 253.977 kb on + strand, within BPHYT_RS20910 at 254.045 kb on + strand, within BPHYT_RS20910 at 254.077 kb on + strand, within BPHYT_RS20910 at 254.078 kb on - strand, within BPHYT_RS20910 at 254.309 kb on + strand at 254.397 kb on - strand at 254.707 kb on + strand, within BPHYT_RS20915 at 255.056 kb on - strand, within BPHYT_RS20915 at 255.607 kb on - strand, within BPHYT_RS20920 at 255.607 kb on - strand, within BPHYT_RS20920 at 255.618 kb on + strand, within BPHYT_RS20920 at 255.836 kb on + strand, within BPHYT_RS20920 at 255.837 kb on - strand, within BPHYT_RS20920 at 255.837 kb on - strand, within BPHYT_RS20920 at 256.216 kb on + strand at 256.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 253,498 + BPHYT_RS20910 0.60 -0.3 253,872 + BPHYT_RS20910 0.76 -0.3 253,873 - BPHYT_RS20910 0.76 -0.3 253,876 + BPHYT_RS20910 0.76 -0.5 253,877 - BPHYT_RS20910 0.76 +0.0 253,977 + BPHYT_RS20910 0.81 -0.2 254,045 + BPHYT_RS20910 0.84 -0.1 254,077 + BPHYT_RS20910 0.85 +1.6 254,078 - BPHYT_RS20910 0.85 -0.4 254,309 + +2.0 254,397 - +1.1 254,707 + BPHYT_RS20915 0.28 -3.0 255,056 - BPHYT_RS20915 0.62 -0.3 255,607 - BPHYT_RS20920 0.29 +0.6 255,607 - BPHYT_RS20920 0.29 +0.7 255,618 + BPHYT_RS20920 0.32 -3.3 255,836 + BPHYT_RS20920 0.71 -0.5 255,837 - BPHYT_RS20920 0.72 +1.4 255,837 - BPHYT_RS20920 0.72 +0.4 256,216 + -1.1 256,304 + -0.4
Or see this region's nucleotide sequence