Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20170
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
|---|---|---|---|---|---|
| remove | |||||
| 67,514 | - | BPHYT_RS20165 | 0.63 | -1.0 | |
| 67,676 | - | BPHYT_RS20165 | 0.76 | -0.0 | |
| 67,728 | + | BPHYT_RS20165 | 0.81 | -0.6 | |
| 68,162 | + | -0.2 | |||
| 68,450 | - | BPHYT_RS20170 | 0.14 | +0.2 | |
| 68,727 | + | BPHYT_RS20170 | 0.27 | +2.0 | |
| 69,303 | - | BPHYT_RS20170 | 0.52 | -1.3 | |
| 69,871 | - | BPHYT_RS20170 | 0.78 | +0.1 | |
| 70,860 | - | -0.5 | |||
| 70,889 | + | -1.9 | |||
| 71,069 | + | BPHYT_RS20180 | 0.19 | +1.0 | |
| 71,182 | + | BPHYT_RS20180 | 0.30 | +1.1 | |
| 71,251 | + | BPHYT_RS20180 | 0.37 | -0.5 |
Or see this region's nucleotide sequence