Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19505

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
4,389,326	-		BPHYT_RS19500	0.52	-0.3
4,389,331	+		BPHYT_RS19500	0.52	-0.8
4,389,332	-		BPHYT_RS19500	0.52	-1.7
4,389,332	-		BPHYT_RS19500	0.52	+0.3
4,389,721	-				+1.2
4,389,721	-		BPHYT_RS19500	0.77	+0.4
4,390,057	+				+0.7
4,390,057	+				+2.1
4,390,057	+				+1.2
4,390,058	-				-0.2
4,390,176	+				-0.4
4,390,177	-				+1.2
4,390,177	-				-0.5
4,390,192	+				+0.1
4,390,192	+				+1.2
4,390,194	+				-1.4
4,390,194	+				-0.7
4,390,195	-				+1.2
4,390,481	+		BPHYT_RS19505	0.29	-0.2
4,390,481	+		BPHYT_RS19505	0.29	-2.2
4,390,482	-		BPHYT_RS19505	0.30	+0.1
4,390,648	+		BPHYT_RS19505	0.48	-0.5
4,390,651	+		BPHYT_RS19505	0.48	-0.5
4,390,651	+		BPHYT_RS19505	0.48	+0.2
4,390,651	+		BPHYT_RS19505	0.48	-0.6
4,390,652	-		BPHYT_RS19505	0.48	+0.1
4,390,652	-		BPHYT_RS19505	0.48	+0.2
4,390,652	-		BPHYT_RS19505	0.48	-1.4
4,390,833	+		BPHYT_RS19505	0.69	-1.0
4,391,037	+				+0.2
4,391,038	-				-0.0
4,391,171	+				+0.5
4,391,172	-				-2.1
4,391,653	+		BPHYT_RS19510	0.41	+0.2
4,391,654	-		BPHYT_RS19510	0.42	-0.8
4,391,654	-		BPHYT_RS19510	0.42	-0.1
4,391,749	+		BPHYT_RS19510	0.59	-0.6
4,391,749	+		BPHYT_RS19510	0.59	+0.1
4,391,749	+		BPHYT_RS19510	0.59	-0.8
4,391,749	+		BPHYT_RS19510	0.59	-0.4
4,391,749	+		BPHYT_RS19510	0.59	-0.1
4,391,750	-		BPHYT_RS19510	0.59	-0.0
4,391,750	-		BPHYT_RS19510	0.59	-0.4
4,391,750	-		BPHYT_RS19510	0.59	-0.7
4,391,795	+		BPHYT_RS19510	0.68	-0.2
4,391,795	+		BPHYT_RS19510	0.68	-0.3
4,391,965	+				-0.4
4,391,965	+				-0.4
4,392,105	+		BPHYT_RS19515	0.17	-2.4
4,392,106	-		BPHYT_RS19515	0.17	-0.8