Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19470

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
4,380,747	+		BPHYT_RS19465	0.77	+3.2
4,380,747	+		BPHYT_RS19465	0.77	+0.2
4,380,748	-		BPHYT_RS19465	0.77	-0.4
4,380,748	-				-0.2
4,380,748	-		BPHYT_RS19465	0.77	+0.8
4,380,823	+		BPHYT_RS19465	0.83	-0.1
4,380,824	-		BPHYT_RS19465	0.83	+0.4
4,381,031	-				-0.3
4,381,159	+				-2.1
4,381,230	+				+2.9
4,381,253	+				+0.3
4,381,372	-				+0.7
4,381,377	+				+0.5
4,381,384	+				-0.3
4,381,384	+				+0.3
4,381,385	-				+0.4
4,381,385	-				-0.4
4,381,390	-				-0.4
4,381,434	-				-1.0
4,381,434	-				+2.8
4,381,436	-				-1.8
4,381,763	-		BPHYT_RS19470	0.23	+1.5
4,381,763	-		BPHYT_RS19470	0.23	-0.5
4,381,816	-		BPHYT_RS19470	0.29	-0.6
4,382,049	+		BPHYT_RS19470	0.53	-1.1
4,382,049	+		BPHYT_RS19470	0.53	+0.6
4,382,049	+		BPHYT_RS19470	0.53	-0.5
4,382,050	-		BPHYT_RS19470	0.53	-1.0
4,382,157	+		BPHYT_RS19470	0.64	-0.8
4,382,157	+		BPHYT_RS19470	0.64	-0.5
4,382,157	+		BPHYT_RS19470	0.64	+0.5
4,382,157	+		BPHYT_RS19470	0.64	-1.1
4,382,158	-		BPHYT_RS19470	0.64	-0.8
4,382,158	-		BPHYT_RS19470	0.64	-0.7
4,382,158	-		BPHYT_RS19470	0.64	-1.1
4,382,158	-		BPHYT_RS19470	0.64	-0.2
4,382,158	-		BPHYT_RS19470	0.64	-0.6
4,382,196	+		BPHYT_RS19470	0.68	-0.2
4,382,196	+				-1.9
4,382,196	+		BPHYT_RS19470	0.68	+0.2
4,382,323	-		BPHYT_RS19470	0.81	+0.4
4,382,323	-		BPHYT_RS19470	0.81	-0.1
4,382,442	+				-1.1
4,382,443	-				-0.8
4,382,490	+				+0.0
4,382,491	-				-0.3
4,383,032	+		BPHYT_RS19475	0.59	-0.3
4,383,206	+		BPHYT_RS19475	0.79	-0.3
4,383,321	-				-1.2
4,383,402	+				+1.6