Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19335 and BPHYT_RS19340 are separated by 30 nucleotides BPHYT_RS19340 and BPHYT_RS19345 are separated by 219 nucleotides
BPHYT_RS19335: BPHYT_RS19335 - hypothetical protein, at 4,343,027 to 4,344,157
_RS19335
BPHYT_RS19340: BPHYT_RS19340 - L-serine ammonia-lyase (EC 4.3.1.17) <small>(from data)</small>, at 4,344,188 to 4,345,576
_RS19340
BPHYT_RS19345: BPHYT_RS19345 - thiamine pyrophosphate protein, at 4,345,796 to 4,347,514
_RS19345
Position (kb) 4344
4345
4346 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4343.444 kb on + strand, within BPHYT_RS19335 at 4343.445 kb on - strand, within BPHYT_RS19335 at 4343.445 kb on - strand, within BPHYT_RS19335 at 4343.795 kb on + strand, within BPHYT_RS19335 at 4343.795 kb on + strand, within BPHYT_RS19335 at 4343.796 kb on - strand, within BPHYT_RS19335 at 4344.083 kb on - strand at 4344.167 kb on - strand at 4344.185 kb on + strand at 4344.185 kb on + strand at 4344.185 kb on + strand at 4344.185 kb on + strand at 4344.186 kb on - strand at 4344.338 kb on + strand, within BPHYT_RS19340 at 4344.339 kb on - strand, within BPHYT_RS19340 at 4344.617 kb on + strand, within BPHYT_RS19340 at 4344.618 kb on - strand, within BPHYT_RS19340 at 4344.618 kb on - strand, within BPHYT_RS19340 at 4344.618 kb on - strand, within BPHYT_RS19340 at 4344.664 kb on + strand, within BPHYT_RS19340 at 4344.891 kb on + strand, within BPHYT_RS19340 at 4345.011 kb on - strand, within BPHYT_RS19340 at 4345.106 kb on + strand, within BPHYT_RS19340 at 4345.107 kb on - strand, within BPHYT_RS19340 at 4345.107 kb on - strand, within BPHYT_RS19340 at 4345.109 kb on + strand, within BPHYT_RS19340 at 4345.109 kb on + strand, within BPHYT_RS19340 at 4345.110 kb on - strand, within BPHYT_RS19340 at 4345.110 kb on - strand, within BPHYT_RS19340 at 4345.110 kb on - strand, within BPHYT_RS19340 at 4345.187 kb on + strand, within BPHYT_RS19340 at 4345.187 kb on + strand, within BPHYT_RS19340 at 4345.187 kb on + strand, within BPHYT_RS19340 at 4345.187 kb on + strand, within BPHYT_RS19340 at 4345.188 kb on - strand, within BPHYT_RS19340 at 4345.188 kb on - strand, within BPHYT_RS19340 at 4345.188 kb on - strand, within BPHYT_RS19340 at 4345.463 kb on + strand at 4345.526 kb on + strand at 4345.526 kb on + strand at 4345.597 kb on + strand at 4345.598 kb on - strand at 4345.654 kb on - strand at 4345.707 kb on + strand at 4345.708 kb on - strand at 4345.708 kb on - strand at 4345.970 kb on - strand, within BPHYT_RS19345 at 4345.970 kb on - strand, within BPHYT_RS19345 at 4346.102 kb on + strand, within BPHYT_RS19345 at 4346.103 kb on - strand, within BPHYT_RS19345 at 4346.103 kb on - strand, within BPHYT_RS19345 at 4346.255 kb on + strand, within BPHYT_RS19345 at 4346.304 kb on + strand, within BPHYT_RS19345 at 4346.422 kb on - strand, within BPHYT_RS19345 at 4346.422 kb on - strand, within BPHYT_RS19345
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 4,343,444 + BPHYT_RS19335 0.37 +1.6 4,343,445 - BPHYT_RS19335 0.37 -1.3 4,343,445 - BPHYT_RS19335 0.37 -0.7 4,343,795 + BPHYT_RS19335 0.68 -0.1 4,343,795 + BPHYT_RS19335 0.68 -1.1 4,343,796 - BPHYT_RS19335 0.68 -2.7 4,344,083 - +1.1 4,344,167 - -0.7 4,344,185 + -1.4 4,344,185 + -0.0 4,344,185 + -1.4 4,344,185 + -0.6 4,344,186 - -0.4 4,344,338 + BPHYT_RS19340 0.11 -1.7 4,344,339 - BPHYT_RS19340 0.11 +1.2 4,344,617 + BPHYT_RS19340 0.31 +1.6 4,344,618 - BPHYT_RS19340 0.31 -1.1 4,344,618 - BPHYT_RS19340 0.31 +0.3 4,344,618 - BPHYT_RS19340 0.31 +0.8 4,344,664 + BPHYT_RS19340 0.34 +1.4 4,344,891 + BPHYT_RS19340 0.51 +1.0 4,345,011 - BPHYT_RS19340 0.59 +0.2 4,345,106 + BPHYT_RS19340 0.66 -0.9 4,345,107 - BPHYT_RS19340 0.66 -0.3 4,345,107 - BPHYT_RS19340 0.66 +0.9 4,345,109 + BPHYT_RS19340 0.66 -0.3 4,345,109 + BPHYT_RS19340 0.66 -0.6 4,345,110 - BPHYT_RS19340 0.66 +1.4 4,345,110 - BPHYT_RS19340 0.66 -2.4 4,345,110 - BPHYT_RS19340 0.66 +0.6 4,345,187 + BPHYT_RS19340 0.72 +1.5 4,345,187 + BPHYT_RS19340 0.72 -0.4 4,345,187 + BPHYT_RS19340 0.72 -0.5 4,345,187 + BPHYT_RS19340 0.72 +0.5 4,345,188 - BPHYT_RS19340 0.72 +1.2 4,345,188 - BPHYT_RS19340 0.72 +0.1 4,345,188 - BPHYT_RS19340 0.72 -1.3 4,345,463 + -2.1 4,345,526 + +2.6 4,345,526 + +0.5 4,345,597 + +1.5 4,345,598 - +0.1 4,345,654 - -0.1 4,345,707 + +0.6 4,345,708 - -0.2 4,345,708 - -0.0 4,345,970 - BPHYT_RS19345 0.10 -0.6 4,345,970 - BPHYT_RS19345 0.10 -1.5 4,346,102 + BPHYT_RS19345 0.18 -0.4 4,346,103 - BPHYT_RS19345 0.18 -0.5 4,346,103 - BPHYT_RS19345 0.18 +0.1 4,346,255 + BPHYT_RS19345 0.27 +0.4 4,346,304 + BPHYT_RS19345 0.30 +0.2 4,346,422 - BPHYT_RS19345 0.36 +0.3 4,346,422 - BPHYT_RS19345 0.36 -0.7
Or see this region's nucleotide sequence