Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS19210 and BPHYT_RS19215 are separated by 2 nucleotides BPHYT_RS19215 and BPHYT_RS19220 are separated by 90 nucleotides
BPHYT_RS19210: BPHYT_RS19210 - integrase, at 4,312,582 to 4,314,108
_RS19210
BPHYT_RS19215: BPHYT_RS19215 - ATP-binding protein, at 4,314,111 to 4,314,899
_RS19215
BPHYT_RS19220: BPHYT_RS19220 - hypothetical protein, at 4,314,990 to 4,317,170
_RS19220
Position (kb) 4314
4315 Strain fitness (log2 ratio) -1
0
1
2 at 4315.060 kb on - strand at 4315.142 kb on + strand at 4315.143 kb on - strand at 4315.143 kb on - strand at 4315.143 kb on - strand at 4315.233 kb on + strand, within BPHYT_RS19220 at 4315.233 kb on + strand, within BPHYT_RS19220 at 4315.234 kb on - strand, within BPHYT_RS19220 at 4315.234 kb on - strand, within BPHYT_RS19220 at 4315.234 kb on - strand, within BPHYT_RS19220 at 4315.240 kb on - strand, within BPHYT_RS19220 at 4315.240 kb on - strand, within BPHYT_RS19220 at 4315.240 kb on - strand, within BPHYT_RS19220 at 4315.272 kb on + strand, within BPHYT_RS19220 at 4315.272 kb on + strand, within BPHYT_RS19220 at 4315.300 kb on + strand, within BPHYT_RS19220 at 4315.380 kb on + strand, within BPHYT_RS19220 at 4315.475 kb on - strand, within BPHYT_RS19220 at 4315.475 kb on - strand, within BPHYT_RS19220 at 4315.485 kb on - strand, within BPHYT_RS19220 at 4315.485 kb on - strand, within BPHYT_RS19220 at 4315.560 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.573 kb on + strand, within BPHYT_RS19220 at 4315.574 kb on - strand, within BPHYT_RS19220 at 4315.575 kb on + strand, within BPHYT_RS19220 at 4315.575 kb on + strand, within BPHYT_RS19220 at 4315.576 kb on - strand, within BPHYT_RS19220 at 4315.576 kb on - strand, within BPHYT_RS19220 at 4315.618 kb on - strand, within BPHYT_RS19220 at 4315.643 kb on - strand, within BPHYT_RS19220 at 4315.643 kb on - strand, within BPHYT_RS19220 at 4315.646 kb on + strand, within BPHYT_RS19220 at 4315.646 kb on + strand, within BPHYT_RS19220 at 4315.647 kb on - strand, within BPHYT_RS19220 at 4315.740 kb on + strand, within BPHYT_RS19220
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 4,315,060 - -0.3 4,315,142 + -0.7 4,315,143 - +0.2 4,315,143 - +0.8 4,315,143 - +1.5 4,315,233 + BPHYT_RS19220 0.11 +1.6 4,315,233 + BPHYT_RS19220 0.11 -0.9 4,315,234 - BPHYT_RS19220 0.11 +0.1 4,315,234 - BPHYT_RS19220 0.11 +1.0 4,315,234 - BPHYT_RS19220 0.11 +0.8 4,315,240 - BPHYT_RS19220 0.11 +0.3 4,315,240 - BPHYT_RS19220 0.11 +1.2 4,315,240 - BPHYT_RS19220 0.11 +0.8 4,315,272 + BPHYT_RS19220 0.13 +0.6 4,315,272 + BPHYT_RS19220 0.13 -0.6 4,315,300 + BPHYT_RS19220 0.14 -1.4 4,315,380 + BPHYT_RS19220 0.18 +0.2 4,315,475 - BPHYT_RS19220 0.22 -0.1 4,315,475 - BPHYT_RS19220 0.22 -0.1 4,315,485 - BPHYT_RS19220 0.23 +2.2 4,315,485 - BPHYT_RS19220 0.23 +0.1 4,315,560 + BPHYT_RS19220 0.26 -0.2 4,315,573 + BPHYT_RS19220 0.27 +0.4 4,315,573 + BPHYT_RS19220 0.27 +1.3 4,315,573 + +1.2 4,315,573 + BPHYT_RS19220 0.27 +1.2 4,315,573 + BPHYT_RS19220 0.27 -0.3 4,315,573 + BPHYT_RS19220 0.27 -0.1 4,315,573 + BPHYT_RS19220 0.27 -0.4 4,315,573 + BPHYT_RS19220 0.27 +0.1 4,315,574 - BPHYT_RS19220 0.27 +1.0 4,315,575 + BPHYT_RS19220 0.27 +0.5 4,315,575 + BPHYT_RS19220 0.27 +0.8 4,315,576 - BPHYT_RS19220 0.27 +1.9 4,315,576 - BPHYT_RS19220 0.27 -0.3 4,315,618 - BPHYT_RS19220 0.29 +0.1 4,315,643 - BPHYT_RS19220 0.30 -0.6 4,315,643 - BPHYT_RS19220 0.30 -0.2 4,315,646 + BPHYT_RS19220 0.30 +1.2 4,315,646 + BPHYT_RS19220 0.30 -1.0 4,315,647 - BPHYT_RS19220 0.30 +0.2 4,315,740 + BPHYT_RS19220 0.34 +0.6
Or see this region's nucleotide sequence