Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19100

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
4,284,917	+				+0.6
4,284,918	-				+0.7
4,284,942	-				+0.9
4,285,061	+				+0.2
4,285,061	+				+0.2
4,285,061	+				-0.8
4,285,062	-				+1.0
4,285,358	+				+1.2
4,285,453	+				+0.3
4,285,453	+				-0.2
4,285,460	+				+0.9
4,285,461	-				-0.3
4,285,623	+				-1.9
4,285,623	+				+1.6
4,285,623	+				-0.2
4,285,624	-				-0.0
4,285,657	+				+0.2
4,285,825	+				-0.3
4,285,826	-				+0.5
4,285,826	-				+0.1
4,285,933	+		BPHYT_RS19100	0.12	+0.4
4,285,933	+		BPHYT_RS19100	0.12	+0.2
4,285,934	-		BPHYT_RS19100	0.12	-0.1
4,285,934	-		BPHYT_RS19100	0.12	-0.6
4,286,213	-		BPHYT_RS19100	0.24	-0.4
4,286,213	-		BPHYT_RS19100	0.24	-1.5
4,286,213	-		BPHYT_RS19100	0.24	+0.0
4,286,483	-		BPHYT_RS19100	0.35	-0.4
4,286,596	+		BPHYT_RS19100	0.40	-0.4
4,286,956	+		BPHYT_RS19100	0.55	-0.7
4,286,957	-		BPHYT_RS19100	0.55	-0.1
4,287,208	+		BPHYT_RS19100	0.66	-1.2
4,287,327	+		BPHYT_RS19100	0.71	-0.8
4,287,346	-		BPHYT_RS19100	0.72	+0.1
4,287,352	+		BPHYT_RS19100	0.72	-0.3
4,287,352	+		BPHYT_RS19100	0.72	-2.1
4,287,353	-		BPHYT_RS19100	0.72	-2.0
4,287,591	+		BPHYT_RS19100	0.82	-0.9
4,287,592	-		BPHYT_RS19100	0.82	-1.0
4,287,614	-		BPHYT_RS19100	0.83	+0.1
4,287,614	-		BPHYT_RS19100	0.83	-0.4
4,287,669	+		BPHYT_RS19100	0.85	-0.4
4,287,703	-		BPHYT_RS19100	0.87	+0.1
4,287,963	-				+1.1
4,288,076	+				+0.0
4,288,077	-				-0.5
4,288,080	+				+0.5
4,288,081	-				-0.3
4,288,081	-				-0.6
4,288,206	+		BPHYT_RS19105	0.17	-0.1
4,288,309	-		BPHYT_RS19105	0.25	-0.6
4,288,507	-		BPHYT_RS19105	0.43	-0.8
4,288,507	-		BPHYT_RS19105	0.43	-0.8
4,288,960	-		BPHYT_RS19105	0.82	-0.8
4,288,986	+		BPHYT_RS19105	0.84	-0.8
4,288,987	-		BPHYT_RS19105	0.84	-2.9
4,288,987	-		BPHYT_RS19105	0.84	-0.3
4,288,999	-		BPHYT_RS19105	0.85	-0.0
4,289,004	+		BPHYT_RS19105	0.85	-0.2
4,289,004	+		BPHYT_RS19105	0.85	-0.0