Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17405

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,943,269	+		BPHYT_RS17400	0.64	-1.7
3,943,277	+		BPHYT_RS17400	0.65	+1.2
3,943,277	+		BPHYT_RS17400	0.65	-0.7
3,943,277	+		BPHYT_RS17400	0.65	-1.2
3,943,278	-		BPHYT_RS17400	0.65	-2.5
3,943,278	-		BPHYT_RS17400	0.65	-2.6
3,943,358	+		BPHYT_RS17400	0.72	-2.4
3,943,359	-		BPHYT_RS17400	0.72	-4.1
3,943,517	+		BPHYT_RS17400	0.88	-2.5
3,943,518	-		BPHYT_RS17400	0.88	-1.7
3,943,518	-		BPHYT_RS17400	0.88	-2.3
3,943,648	+				+0.6
3,943,661	-				-1.1
3,943,672	+				+0.6
3,943,672	+				-1.1
3,943,672	+				+0.2
3,943,672	+				+0.4
3,943,672	+				-0.1
3,943,673	-				+0.2
3,943,673	-				-1.7
3,943,673	-				-1.4
3,943,673	-				+0.9
3,943,673	-				-0.3
3,943,694	-				-1.4
3,943,985	+		BPHYT_RS17405	0.40	-1.3
3,944,492	-				-1.3
3,944,492	-				-1.4
3,944,618	+		BPHYT_RS17410	0.18	-0.6
3,944,622	+		BPHYT_RS17410	0.19	-0.9
3,944,623	-		BPHYT_RS17410	0.19	-0.3
3,945,067	+		BPHYT_RS17410	0.90	+0.3
3,945,067	+		BPHYT_RS17410	0.90	+0.2
3,945,112	-				+1.3