Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17300

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,919,319	+		BPHYT_RS17295	0.53	-2.6
3,919,472	+		BPHYT_RS17295	0.62	+0.6
3,919,541	-		BPHYT_RS17295	0.66	-1.0
3,919,782	+		BPHYT_RS17295	0.81	+1.0
3,919,785	-		BPHYT_RS17295	0.81	+0.9
3,919,785	-		BPHYT_RS17295	0.81	+0.9
3,919,811	+		BPHYT_RS17295	0.82	-0.5
3,919,811	+		BPHYT_RS17295	0.82	-0.4
3,919,812	-				+1.6
3,919,812	-		BPHYT_RS17295	0.83	+0.2
3,919,812	-		BPHYT_RS17295	0.83	+0.9
3,920,039	+				+0.3
3,920,152	+				-0.6
3,920,152	+				-0.2
3,920,152	+				-0.5
3,920,195	-				+1.4
3,920,281	+				-1.0
3,920,281	+				+3.2
3,920,282	-				+3.5
3,920,704	+		BPHYT_RS17300	0.22	+0.7
3,920,704	+		BPHYT_RS17300	0.22	-0.5
3,920,704	+		BPHYT_RS17300	0.22	-0.2
3,920,705	-		BPHYT_RS17300	0.22	-1.4
3,920,705	-		BPHYT_RS17300	0.22	+0.2
3,921,053	-		BPHYT_RS17300	0.39	-0.4
3,921,053	-		BPHYT_RS17300	0.39	-0.4
3,921,166	+		BPHYT_RS17300	0.44	+0.2
3,921,166	+		BPHYT_RS17300	0.44	-0.6
3,921,166	+		BPHYT_RS17300	0.44	-0.8
3,921,167	-		BPHYT_RS17300	0.44	-0.9
3,921,167	-		BPHYT_RS17300	0.44	-0.7
3,921,236	+		BPHYT_RS17300	0.47	-1.1
3,921,237	-		BPHYT_RS17300	0.47	-0.4
3,921,242	+		BPHYT_RS17300	0.48	+0.1
3,921,242	+		BPHYT_RS17300	0.48	+1.1
3,921,467	+		BPHYT_RS17300	0.59	-0.0
3,921,498	-		BPHYT_RS17300	0.60	-0.2
3,921,579	+		BPHYT_RS17300	0.64	-0.4
3,921,579	+		BPHYT_RS17300	0.64	+0.3
3,921,598	+		BPHYT_RS17300	0.65	-0.8
3,921,599	-		BPHYT_RS17300	0.65	-0.3
3,921,708	+		BPHYT_RS17300	0.70	+0.2
3,921,871	+		BPHYT_RS17300	0.78	+0.7
3,921,871	+		BPHYT_RS17300	0.78	+0.4
3,921,872	-		BPHYT_RS17300	0.78	-0.5
3,921,872	-		BPHYT_RS17300	0.78	+0.6
3,921,877	+		BPHYT_RS17300	0.78	-2.0
3,921,877	+		BPHYT_RS17300	0.78	+0.2
3,921,878	-		BPHYT_RS17300	0.78	-0.3
3,921,878	-		BPHYT_RS17300	0.78	+0.3
3,921,978	+		BPHYT_RS17300	0.83	+2.6
3,921,978	+				+4.2
3,921,997	+		BPHYT_RS17300	0.84	+0.1
3,921,998	-		BPHYT_RS17300	0.84	+0.2
3,921,998	-		BPHYT_RS17300	0.84	+0.6
3,922,377	+				-0.4
3,922,378	-				+0.1
3,922,378	-				-4.6
3,922,442	-				+0.8
3,922,444	+				+4.0
3,922,445	-				+1.0
3,922,445	-				+0.2
3,922,640	+		BPHYT_RS17305	0.10	+0.6
3,922,640	+		BPHYT_RS17305	0.10	+0.2
3,922,834	-		BPHYT_RS17305	0.27	+0.6
3,923,304	+		BPHYT_RS17305	0.66	+0.5
3,923,305	-		BPHYT_RS17305	0.66	-0.2