Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17075
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,870,422 | + | +0.4 | |||
3,870,760 | - | +0.3 | |||
3,870,787 | - | +1.2 | |||
3,870,833 | - | +0.9 | |||
3,870,833 | - | -1.2 | |||
3,871,020 | + | BPHYT_RS17075 | 0.26 | -1.4 | |
3,871,020 | + | BPHYT_RS17075 | 0.26 | -0.3 | |
3,871,021 | - | BPHYT_RS17075 | 0.26 | +2.2 | |
3,871,403 | - | BPHYT_RS17075 | 0.67 | +0.0 | |
3,871,403 | - | BPHYT_RS17075 | 0.67 | +0.4 | |
3,871,484 | + | BPHYT_RS17075 | 0.76 | +1.2 | |
3,871,694 | - | +1.7 | |||
3,871,694 | - | +1.9 | |||
3,871,698 | + | -0.5 | |||
3,871,698 | + | -2.2 | |||
3,871,698 | + | -1.0 | |||
3,871,698 | + | +0.2 | |||
3,871,699 | - | +0.9 | |||
3,871,699 | - | -0.4 | |||
3,871,720 | + | +0.3 | |||
3,871,725 | + | +0.8 |
Or see this region's nucleotide sequence