Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16940

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,840,744	+		BPHYT_RS16935	0.32	-0.0
3,840,924	+		BPHYT_RS16935	0.50	+0.4
3,840,925	-		BPHYT_RS16935	0.50	+0.3
3,841,017	+		BPHYT_RS16935	0.59	-0.4
3,841,017	+		BPHYT_RS16935	0.59	-0.3
3,841,027	+		BPHYT_RS16935	0.60	+0.2
3,841,033	+		BPHYT_RS16935	0.61	-0.9
3,841,444	+				+0.6
3,841,445	-				+0.9
3,841,445	-				-1.3
3,841,445	-				-0.6
3,841,520	+				-0.4
3,841,771	+		BPHYT_RS16940	0.28	-1.7
3,841,772	-		BPHYT_RS16940	0.28	-0.8
3,841,813	+		BPHYT_RS16940	0.33	-0.5
3,842,073	+		BPHYT_RS16940	0.66	-0.3
3,842,073	+		BPHYT_RS16940	0.66	-0.9
3,842,073	+		BPHYT_RS16940	0.66	-0.4
3,842,073	+		BPHYT_RS16940	0.66	-1.1
3,842,074	-		BPHYT_RS16940	0.67	+2.8
3,842,373	+				+0.2
3,842,374	-				+1.8
3,842,419	+		BPHYT_RS16945	0.13	+0.3
3,842,421	+		BPHYT_RS16945	0.13	-0.2
3,842,421	+		BPHYT_RS16945	0.13	+0.4
3,842,422	-		BPHYT_RS16945	0.14	-0.4
3,842,422	-				+0.3
3,842,492	-		BPHYT_RS16945	0.24	-0.4
3,842,979	+				-0.0
3,842,979	+				-2.2
3,842,980	-				-1.2
3,843,301	-		BPHYT_RS16950	0.24	-0.5
3,843,301	-		BPHYT_RS16950	0.24	+1.2
3,843,301	-		BPHYT_RS16950	0.24	+0.4