Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16865

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,825,319	+				+1.5
3,825,320	-				-1.7
3,825,353	+				+4.0
3,825,353	+				+1.1
3,825,353	+				+0.6
3,825,354	-				+0.3
3,825,354	-				+1.6
3,825,426	+				+0.9
3,825,820	+		BPHYT_RS16860	0.65	-1.7
3,825,820	+		BPHYT_RS16860	0.65	-1.7
3,826,046	-				+0.0
3,826,046	-				-0.3
3,826,046	-				+0.2
3,826,046	-				+1.1
3,826,062	+				-0.7
3,826,062	+				-0.6
3,826,062	+				+1.5
3,826,062	+				+1.1
3,826,063	-				-0.3
3,826,077	+		BPHYT_RS16865	0.10	+1.0
3,826,078	-		BPHYT_RS16865	0.11	-3.1
3,826,080	+		BPHYT_RS16865	0.11	-3.0
3,826,138	+		BPHYT_RS16865	0.25	+1.4
3,826,164	+		BPHYT_RS16865	0.31	+3.7
3,826,165	-		BPHYT_RS16865	0.31	-1.1
3,826,165	-		BPHYT_RS16865	0.31	+0.7
3,826,174	-		BPHYT_RS16865	0.34	+0.2
3,826,176	+		BPHYT_RS16865	0.34	+1.2
3,826,177	-		BPHYT_RS16865	0.34	+1.0
3,826,220	+		BPHYT_RS16865	0.45	+0.8
3,826,240	-		BPHYT_RS16865	0.49	-0.7
3,826,276	+		BPHYT_RS16865	0.58	+1.2
3,826,389	-		BPHYT_RS16865	0.85	-1.8
3,826,402	+		BPHYT_RS16865	0.88	+0.6
3,826,403	-		BPHYT_RS16865	0.88	+0.2
3,826,452	+				+0.6
3,826,452	+				-2.3
3,826,452	+				+2.4
3,826,452	+				+2.1
3,826,471	+				+2.7
3,826,472	-				+2.1
3,826,514	+				+0.8
3,826,557	+				+0.3
3,826,557	+				+0.7
3,826,557	+				+1.7
3,826,558	-				+0.6
3,826,618	+				+0.3
3,826,810	+				+0.2
3,826,810	+				-0.6
3,826,811	-				+0.1
3,826,865	+				+2.7
3,826,865	-				-0.6
3,826,936	+				+0.3
3,826,937	-				+0.3
3,826,950	+				+0.0
3,826,950	+				-0.8
3,826,950	+				-0.8
3,826,950	+				-0.3
3,826,951	-				+0.5
3,826,951	-				-1.8
3,826,973	+				-0.3
3,826,974	-				+0.4
3,826,993	+				+0.8
3,826,994	-				-0.2
3,827,014	+				-1.7
3,827,044	+				-0.8
3,827,044	+				+0.6
3,827,045	-				-0.3
3,827,045	-				-1.0
3,827,321	+				+0.4
3,827,321	+				-0.7
3,827,322	-				-2.1
3,827,322	-				-0.7
3,827,345	+				-0.8
3,827,346	-				+0.8
3,827,346	-				-0.4
3,827,346	-				-0.5
3,827,346	-				-0.5
3,827,348	+				-0.1
3,827,348	+				-1.4
3,827,349	-				-2.0
3,827,349	-				-0.2