Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16170
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
3,669,052 | - | -0.5 | |||
3,669,052 | - | +0.4 | |||
3,670,612 | - | BPHYT_RS16170 | 0.51 | +0.3 | |
3,672,418 | - | BPHYT_RS16175 | 0.17 | +0.7 | |
3,672,790 | + | BPHYT_RS16175 | 0.47 | +2.5 | |
3,672,863 | + | BPHYT_RS16175 | 0.53 | +1.7 | |
3,673,147 | - | BPHYT_RS16175 | 0.76 | +2.1 | |
3,673,147 | - | BPHYT_RS16175 | 0.76 | +1.1 |
Or see this region's nucleotide sequence