Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15730

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
3,568,589	+		BPHYT_RS15725	0.19	-0.2
3,568,604	+		BPHYT_RS15725	0.21	+0.2
3,568,604	+		BPHYT_RS15725	0.21	-0.3
3,568,604	+		BPHYT_RS15725	0.21	-0.2
3,568,647	-		BPHYT_RS15725	0.26	+2.5
3,568,845	-		BPHYT_RS15725	0.51	-0.1
3,568,845	-		BPHYT_RS15725	0.51	-0.1
3,569,035	-		BPHYT_RS15725	0.75	+0.6
3,569,198	+				-0.8
3,569,216	+				+0.4
3,569,217	-				-0.3
3,569,217	-				+0.0
3,569,248	-				+0.9
3,569,303	+				-0.0
3,569,303	+				-0.3
3,569,304	-				-1.0
3,569,393	+				-0.5
3,569,394	-				+0.8
3,569,427	-				+2.7
3,569,638	+				-0.0
3,569,638	+				-1.7
3,569,639	-				-1.3
3,569,772	+		BPHYT_RS15730	0.17	-3.5
3,569,883	+		BPHYT_RS15730	0.26	+1.8
3,569,883	+		BPHYT_RS15730	0.26	-3.5
3,569,884	-		BPHYT_RS15730	0.26	+0.6
3,569,884	-		BPHYT_RS15730	0.26	+0.6
3,569,884	-		BPHYT_RS15730	0.26	-1.4
3,570,328	-		BPHYT_RS15730	0.61	-0.8
3,570,408	+		BPHYT_RS15730	0.68	-0.6
3,570,409	-		BPHYT_RS15730	0.68	-3.4
3,570,432	+		BPHYT_RS15730	0.70	-0.9
3,570,432	+		BPHYT_RS15730	0.70	-2.9
3,570,433	-		BPHYT_RS15730	0.70	-1.1
3,570,433	-		BPHYT_RS15730	0.70	-0.7
3,570,433	-		BPHYT_RS15730	0.70	+0.5
3,570,433	-		BPHYT_RS15730	0.70	-1.4
3,570,433	-		BPHYT_RS15730	0.70	+2.7
3,570,433	-		BPHYT_RS15730	0.70	-0.1
3,570,522	+		BPHYT_RS15730	0.77	-0.6
3,570,523	-		BPHYT_RS15730	0.77	-0.4
3,570,523	-		BPHYT_RS15730	0.77	-0.8
3,570,573	+		BPHYT_RS15730	0.81	-2.4
3,570,574	-		BPHYT_RS15730	0.81	+0.9
3,570,574	-		BPHYT_RS15730	0.81	-0.6
3,570,574	-		BPHYT_RS15730	0.81	-1.2
3,570,637	-		BPHYT_RS15730	0.86	+3.1
3,570,713	-				-0.8
3,571,013	-				+0.5
3,571,107	-				+0.0
3,571,126	+				-0.8
3,571,127	-				-0.6
3,571,413	-		BPHYT_RS15735	0.50	+0.3
3,571,521	+		BPHYT_RS15735	0.69	-0.5
3,571,593	+		BPHYT_RS15735	0.82	-1.1
3,571,596	+		BPHYT_RS15735	0.82	-0.3
3,571,597	-		BPHYT_RS15735	0.82	+0.1
3,571,597	-		BPHYT_RS15735	0.82	-1.7
3,571,772	-				+0.1
3,571,809	+				-0.4
3,571,810	-				+0.8