Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11555
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
|---|---|---|---|---|---|
| remove | |||||
| 2,625,655 | - | BPHYT_RS11545 | 0.84 | -2.4 | |
| 2,625,898 | + | -0.1 | |||
| 2,626,623 | + | BPHYT_RS11555 | 0.22 | +1.2 | |
| 2,626,872 | + | BPHYT_RS11555 | 0.48 | -1.7 | |
| 2,627,134 | - | BPHYT_RS11555 | 0.76 | -2.8 | |
| 2,627,140 | - | BPHYT_RS11555 | 0.76 | -0.5 | |
| 2,627,346 | + | -0.0 | |||
| 2,627,445 | + | -1.8 | |||
| 2,627,583 | - | +1.8 | |||
| 2,627,597 | - | -0.0 | |||
| 2,627,995 | - | BPHYT_RS11560 | 0.45 | +0.5 |
Or see this region's nucleotide sequence