Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11255
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,557,397 | - | BPHYT_RS11250 | 0.38 | +0.4 | |
2,557,565 | - | BPHYT_RS11250 | 0.53 | +0.2 | |
2,557,603 | + | BPHYT_RS11250 | 0.56 | +1.5 | |
2,557,810 | + | BPHYT_RS11250 | 0.75 | -1.3 | |
2,558,009 | - | -0.3 | |||
2,558,096 | + | +1.2 | |||
2,558,097 | - | +0.8 | |||
2,558,543 | + | BPHYT_RS11255 | 0.52 | +1.2 | |
2,558,543 | + | BPHYT_RS11255 | 0.52 | +0.7 | |
2,558,543 | + | BPHYT_RS11255 | 0.52 | +1.1 | |
2,558,933 | - | -2.0 | |||
2,559,423 | + | BPHYT_RS11260 | 0.56 | -3.2 | |
2,559,509 | + | BPHYT_RS11260 | 0.66 | +0.7 | |
2,559,510 | - | BPHYT_RS11260 | 0.66 | -0.5 | |
2,559,618 | - | BPHYT_RS11260 | 0.78 | -0.1 |
Or see this region's nucleotide sequence