Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10865
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,470,507 | - | BPHYT_RS10860 | 0.15 | +0.9 | |
2,470,938 | - | BPHYT_RS10860 | 0.80 | +0.0 | |
2,471,060 | - | +1.1 | |||
2,471,120 | - | +0.0 | |||
2,471,207 | + | -0.3 | |||
2,471,317 | + | -1.0 | |||
2,471,318 | - | -0.7 | |||
2,471,319 | + | -0.8 | |||
2,471,521 | + | +0.4 | |||
2,471,522 | - | +0.1 | |||
2,471,750 | + | BPHYT_RS10865 | 0.26 | -1.5 | |
2,472,030 | - | BPHYT_RS10865 | 0.46 | -0.6 | |
2,472,050 | + | BPHYT_RS10865 | 0.48 | +0.8 | |
2,472,260 | + | BPHYT_RS10865 | 0.63 | +0.9 | |
2,472,336 | - | BPHYT_RS10865 | 0.69 | +0.9 | |
2,472,337 | + | BPHYT_RS10865 | 0.69 | +0.3 | |
2,472,438 | - | BPHYT_RS10865 | 0.76 | +0.3 |
Or see this region's nucleotide sequence