Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10250
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
2,329,835 | + | BPHYT_RS10245 | 0.17 | +0.7 | |
2,329,835 | + | BPHYT_RS10245 | 0.17 | +0.5 | |
2,330,698 | + | -0.6 | |||
2,330,789 | + | BPHYT_RS10250 | 0.15 | +0.2 | |
2,330,789 | + | BPHYT_RS10250 | 0.15 | -0.1 | |
2,330,789 | + | BPHYT_RS10250 | 0.15 | -0.7 | |
2,330,790 | - | BPHYT_RS10250 | 0.15 | +0.3 | |
2,330,790 | - | BPHYT_RS10250 | 0.15 | +0.2 | |
2,330,998 | - | BPHYT_RS10250 | 0.57 | +0.6 | |
2,331,314 | - | -0.5 | |||
2,331,378 | - | +0.8 | |||
2,331,434 | - | +0.6 | |||
2,331,568 | - | BPHYT_RS10255 | 0.24 | -0.0 | |
2,332,108 | - | BPHYT_RS10255 | 0.84 | -0.0 |
Or see this region's nucleotide sequence