Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10160
Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Deoxyribonucleic from herring sperm 10 mg/mL (C) |
|---|---|---|---|---|---|
| remove | |||||
| 2,311,942 | + | BPHYT_RS10155 | 0.52 | +0.6 | |
| 2,312,162 | - | BPHYT_RS10155 | 0.69 | -0.0 | |
| 2,312,170 | + | BPHYT_RS10155 | 0.69 | -2.3 | |
| 2,312,172 | + | BPHYT_RS10155 | 0.69 | +2.9 | |
| 2,312,173 | - | BPHYT_RS10155 | 0.69 | -1.1 | |
| 2,312,442 | + | -0.5 | |||
| 2,314,137 | + | BPHYT_RS10160 | 0.47 | -0.3 | |
| 2,314,926 | + | BPHYT_RS10160 | 0.77 | +0.1 | |
| 2,315,404 | - | -0.8 | |||
| 2,315,511 | + | +1.2 | |||
| 2,315,511 | + | -1.0 | |||
| 2,315,512 | - | +1.1 | |||
| 2,315,512 | - | -1.0 | |||
| 2,315,640 | - | -0.1 | |||
| 2,315,640 | - | -0.3 | |||
| 2,315,660 | - | -0.9 | |||
| 2,315,727 | + | +0.3 | |||
| 2,315,728 | - | -0.2 | |||
| 2,315,728 | - | -0.4 | |||
| 2,316,232 | + | BPHYT_RS10165 | 0.46 | +0.9 | |
| 2,316,276 | + | BPHYT_RS10165 | 0.56 | -0.3 |
Or see this region's nucleotide sequence