Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS05935 and BPHYT_RS05940 are separated by 273 nucleotides BPHYT_RS05940 and BPHYT_RS05945 are separated by 103 nucleotides BPHYT_RS05945 and BPHYT_RS05950 are separated by 165 nucleotides
BPHYT_RS05935: BPHYT_RS05935 - DNA topoisomerase IV subunit A, at 1,348,030 to 1,350,354
_RS05935
BPHYT_RS05940: BPHYT_RS05940 - membrane protein, at 1,350,628 to 1,351,086
_RS05940
BPHYT_RS05945: BPHYT_RS05945 - chromate transporter, at 1,351,190 to 1,352,398
_RS05945
BPHYT_RS05950: BPHYT_RS05950 - dGTP triphosphohydrolase, at 1,352,564 to 1,354,918
_RS05950
Position (kb) 1351
1352
1353 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1350.389 kb on + strand at 1350.390 kb on - strand at 1350.395 kb on - strand at 1350.472 kb on + strand at 1350.472 kb on + strand at 1350.543 kb on + strand at 1350.544 kb on - strand at 1350.749 kb on + strand, within BPHYT_RS05940 at 1350.750 kb on - strand, within BPHYT_RS05940 at 1350.927 kb on + strand, within BPHYT_RS05940 at 1351.254 kb on + strand at 1351.254 kb on + strand at 1351.311 kb on + strand, within BPHYT_RS05945 at 1351.311 kb on + strand, within BPHYT_RS05945 at 1351.878 kb on + strand, within BPHYT_RS05945 at 1351.899 kb on + strand, within BPHYT_RS05945 at 1351.899 kb on + strand, within BPHYT_RS05945 at 1351.900 kb on - strand, within BPHYT_RS05945 at 1351.972 kb on + strand, within BPHYT_RS05945 at 1351.975 kb on - strand, within BPHYT_RS05945 at 1352.064 kb on + strand, within BPHYT_RS05945 at 1352.262 kb on + strand, within BPHYT_RS05945 at 1352.428 kb on + strand at 1353.288 kb on - strand, within BPHYT_RS05950 at 1353.288 kb on - strand, within BPHYT_RS05950 at 1353.342 kb on + strand, within BPHYT_RS05950
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,350,389 + -2.4 1,350,390 - -0.1 1,350,395 - +1.8 1,350,472 + +0.9 1,350,472 + -3.0 1,350,543 + +0.9 1,350,544 - +1.9 1,350,749 + BPHYT_RS05940 0.26 +0.2 1,350,750 - BPHYT_RS05940 0.27 -0.2 1,350,927 + BPHYT_RS05940 0.65 -0.3 1,351,254 + -0.4 1,351,254 + +1.9 1,351,311 + BPHYT_RS05945 0.10 +1.3 1,351,311 + BPHYT_RS05945 0.10 +1.1 1,351,878 + BPHYT_RS05945 0.57 +0.0 1,351,899 + BPHYT_RS05945 0.59 +0.0 1,351,899 + BPHYT_RS05945 0.59 +2.2 1,351,900 - BPHYT_RS05945 0.59 +0.2 1,351,972 + BPHYT_RS05945 0.65 +1.3 1,351,975 - BPHYT_RS05945 0.65 +0.8 1,352,064 + BPHYT_RS05945 0.72 +0.8 1,352,262 + BPHYT_RS05945 0.89 +0.0 1,352,428 + +0.4 1,353,288 - BPHYT_RS05950 0.31 +0.6 1,353,288 - BPHYT_RS05950 0.31 +0.0 1,353,342 + BPHYT_RS05950 0.33 -0.6
Or see this region's nucleotide sequence