Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05060

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
1,165,599	-		BPHYT_RS05055	0.43	-0.0
1,165,599	-		BPHYT_RS05055	0.43	-1.7
1,165,897	+		BPHYT_RS05055	0.63	+0.3
1,165,898	-		BPHYT_RS05055	0.63	-0.3
1,165,898	-		BPHYT_RS05055	0.63	+1.4
1,165,898	-		BPHYT_RS05055	0.63	-0.2
1,165,936	+		BPHYT_RS05055	0.65	-0.7
1,166,143	-				+2.1
1,166,314	+				-0.1
1,166,398	+				+0.6
1,166,520	-				+2.3
1,166,520	-				-1.3
1,166,603	+		BPHYT_RS05060	0.13	+1.1
1,166,603	+		BPHYT_RS05060	0.13	+0.9
1,166,639	+		BPHYT_RS05060	0.19	+0.8
1,166,640	-		BPHYT_RS05060	0.19	+1.2
1,166,640	-		BPHYT_RS05060	0.19	+1.2
1,166,640	-		BPHYT_RS05060	0.19	+1.5
1,166,640	-		BPHYT_RS05060	0.19	+0.3
1,166,640	-		BPHYT_RS05060	0.19	+2.7
1,166,815	+		BPHYT_RS05060	0.47	-0.3
1,166,815	+		BPHYT_RS05060	0.47	+0.5
1,166,815	+		BPHYT_RS05060	0.47	+1.4
1,166,816	-		BPHYT_RS05060	0.47	+1.5
1,166,816	-		BPHYT_RS05060	0.47	+1.4
1,166,816	-		BPHYT_RS05060	0.47	+1.3
1,166,937	-		BPHYT_RS05060	0.67	+0.0
1,166,958	-		BPHYT_RS05060	0.70	+0.5
1,167,299	+		BPHYT_RS05065	0.19	+3.8
1,167,300	-		BPHYT_RS05065	0.19	-0.8
1,167,734	+		BPHYT_RS05065	0.76	-0.3
1,167,943	-				-2.7