Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03855 and BPHYT_RS03860 are separated by 132 nucleotides BPHYT_RS03860 and BPHYT_RS03865 are separated by 390 nucleotides
BPHYT_RS03855: BPHYT_RS03855 - alanine--glyoxylate aminotransferase, at 872,727 to 873,965
_RS03855
BPHYT_RS03860: BPHYT_RS03860 - MFS transporter, at 874,098 to 875,309
_RS03860
BPHYT_RS03865: BPHYT_RS03865 - FAD-binding molybdopterin dehydrogenase, at 875,700 to 877,223
_RS03865
Position (kb) 874
875
876 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 873.224 kb on + strand, within BPHYT_RS03855 at 873.225 kb on - strand, within BPHYT_RS03855 at 873.237 kb on + strand, within BPHYT_RS03855 at 873.519 kb on + strand, within BPHYT_RS03855 at 873.519 kb on + strand, within BPHYT_RS03855 at 873.661 kb on + strand, within BPHYT_RS03855 at 873.664 kb on - strand, within BPHYT_RS03855 at 874.011 kb on + strand at 874.141 kb on + strand at 874.141 kb on + strand at 874.141 kb on + strand at 874.141 kb on + strand at 874.142 kb on - strand at 874.580 kb on - strand, within BPHYT_RS03860 at 874.598 kb on + strand, within BPHYT_RS03860 at 874.751 kb on + strand, within BPHYT_RS03860 at 875.126 kb on - strand, within BPHYT_RS03860 at 875.126 kb on - strand, within BPHYT_RS03860 at 875.162 kb on + strand, within BPHYT_RS03860 at 875.163 kb on - strand, within BPHYT_RS03860 at 875.163 kb on - strand, within BPHYT_RS03860 at 875.185 kb on + strand, within BPHYT_RS03860 at 875.185 kb on + strand, within BPHYT_RS03860 at 875.420 kb on + strand at 875.422 kb on + strand at 875.422 kb on + strand at 875.423 kb on - strand at 875.477 kb on + strand at 875.590 kb on - strand at 875.612 kb on + strand at 875.622 kb on - strand at 875.692 kb on - strand at 875.721 kb on + strand at 875.781 kb on + strand at 875.781 kb on + strand at 875.949 kb on + strand, within BPHYT_RS03865 at 875.950 kb on - strand, within BPHYT_RS03865 at 876.098 kb on + strand, within BPHYT_RS03865 at 876.098 kb on + strand, within BPHYT_RS03865 at 876.099 kb on - strand, within BPHYT_RS03865 at 876.099 kb on - strand, within BPHYT_RS03865 at 876.099 kb on - strand, within BPHYT_RS03865 at 876.269 kb on + strand, within BPHYT_RS03865 at 876.269 kb on + strand, within BPHYT_RS03865 at 876.269 kb on + strand, within BPHYT_RS03865
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 873,224 + BPHYT_RS03855 0.40 +1.1 873,225 - BPHYT_RS03855 0.40 +0.7 873,237 + BPHYT_RS03855 0.41 -0.5 873,519 + BPHYT_RS03855 0.64 -0.4 873,519 + BPHYT_RS03855 0.64 -0.1 873,661 + BPHYT_RS03855 0.75 -0.0 873,664 - BPHYT_RS03855 0.76 +0.3 874,011 + -0.4 874,141 + +1.7 874,141 + -1.7 874,141 + -1.1 874,141 + -1.7 874,142 - -1.2 874,580 - BPHYT_RS03860 0.40 +0.1 874,598 + BPHYT_RS03860 0.41 -0.8 874,751 + BPHYT_RS03860 0.54 +0.9 875,126 - BPHYT_RS03860 0.85 -0.8 875,126 - BPHYT_RS03860 0.85 -1.0 875,162 + BPHYT_RS03860 0.88 -0.5 875,163 - BPHYT_RS03860 0.88 -1.2 875,163 - BPHYT_RS03860 0.88 -0.4 875,185 + BPHYT_RS03860 0.90 +0.1 875,185 + BPHYT_RS03860 0.90 +2.4 875,420 + +0.9 875,422 + -2.2 875,422 + -1.8 875,423 - -3.2 875,477 + +0.4 875,590 - -1.9 875,612 + -1.6 875,622 - -0.9 875,692 - -0.9 875,721 + -0.6 875,781 + +0.6 875,781 + -1.2 875,949 + BPHYT_RS03865 0.16 -1.6 875,950 - BPHYT_RS03865 0.16 -3.6 876,098 + BPHYT_RS03865 0.26 -1.0 876,098 + BPHYT_RS03865 0.26 -1.5 876,099 - BPHYT_RS03865 0.26 -0.7 876,099 - BPHYT_RS03865 0.26 -1.2 876,099 - BPHYT_RS03865 0.26 -0.9 876,269 + BPHYT_RS03865 0.37 -0.8 876,269 + BPHYT_RS03865 0.37 -0.8 876,269 + BPHYT_RS03865 0.37 -1.5
Or see this region's nucleotide sequence