Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03550 and BPHYT_RS03555 are separated by 186 nucleotides BPHYT_RS03555 and BPHYT_RS03560 are separated by 289 nucleotides
BPHYT_RS03550: BPHYT_RS03550 - hypothetical protein, at 800,123 to 804,313
_RS03550
BPHYT_RS03555: BPHYT_RS03555 - glutamine-synthetase adenylyltransferase, at 804,500 to 807,292
_RS03555
BPHYT_RS03560: BPHYT_RS03560 - DNA repair protein, at 807,582 to 809,252
_RS03560
Position (kb) 804
805
806
807
808 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 803.547 kb on + strand, within BPHYT_RS03550 at 803.547 kb on + strand, within BPHYT_RS03550 at 803.547 kb on + strand, within BPHYT_RS03550 at 803.547 kb on + strand at 803.548 kb on - strand, within BPHYT_RS03550 at 803.548 kb on - strand, within BPHYT_RS03550 at 803.548 kb on - strand, within BPHYT_RS03550 at 803.708 kb on - strand, within BPHYT_RS03550 at 804.012 kb on - strand at 804.153 kb on + strand at 804.154 kb on - strand at 804.331 kb on + strand at 804.336 kb on + strand at 804.362 kb on + strand at 804.380 kb on - strand at 804.450 kb on + strand at 804.451 kb on - strand at 804.451 kb on - strand at 804.531 kb on - strand at 804.531 kb on - strand at 804.531 kb on - strand at 804.622 kb on + strand at 804.977 kb on + strand, within BPHYT_RS03555 at 804.978 kb on - strand, within BPHYT_RS03555 at 805.175 kb on + strand, within BPHYT_RS03555 at 805.175 kb on + strand, within BPHYT_RS03555 at 805.181 kb on + strand, within BPHYT_RS03555 at 805.182 kb on - strand, within BPHYT_RS03555 at 805.208 kb on + strand, within BPHYT_RS03555 at 805.208 kb on + strand, within BPHYT_RS03555 at 805.208 kb on + strand, within BPHYT_RS03555 at 805.625 kb on + strand, within BPHYT_RS03555 at 805.631 kb on - strand, within BPHYT_RS03555 at 805.709 kb on + strand, within BPHYT_RS03555 at 805.710 kb on - strand, within BPHYT_RS03555 at 805.789 kb on - strand, within BPHYT_RS03555 at 805.881 kb on + strand, within BPHYT_RS03555 at 806.117 kb on + strand, within BPHYT_RS03555 at 806.118 kb on - strand, within BPHYT_RS03555 at 806.118 kb on - strand, within BPHYT_RS03555 at 806.589 kb on - strand, within BPHYT_RS03555 at 806.589 kb on - strand, within BPHYT_RS03555 at 806.589 kb on - strand, within BPHYT_RS03555 at 806.589 kb on - strand, within BPHYT_RS03555 at 806.621 kb on + strand, within BPHYT_RS03555 at 806.630 kb on + strand, within BPHYT_RS03555 at 806.630 kb on + strand, within BPHYT_RS03555 at 806.630 kb on + strand, within BPHYT_RS03555 at 806.631 kb on - strand, within BPHYT_RS03555 at 806.788 kb on + strand, within BPHYT_RS03555 at 807.035 kb on + strand at 807.100 kb on - strand at 807.165 kb on - strand at 807.173 kb on + strand at 807.178 kb on + strand at 807.178 kb on + strand at 807.244 kb on + strand at 807.244 kb on + strand at 807.583 kb on + strand at 807.584 kb on - strand at 807.584 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 803,547 + BPHYT_RS03550 0.82 -1.0 803,547 + BPHYT_RS03550 0.82 -1.1 803,547 + BPHYT_RS03550 0.82 -0.5 803,547 + -0.4 803,548 - BPHYT_RS03550 0.82 -0.1 803,548 - BPHYT_RS03550 0.82 +0.2 803,548 - BPHYT_RS03550 0.82 +0.4 803,708 - BPHYT_RS03550 0.86 -1.0 804,012 - +0.1 804,153 + +1.7 804,154 - -0.5 804,331 + -1.2 804,336 + -1.0 804,362 + -0.6 804,380 - +0.5 804,450 + +0.6 804,451 - +0.6 804,451 - +0.1 804,531 - +3.2 804,531 - +3.3 804,531 - +3.6 804,622 + -0.3 804,977 + BPHYT_RS03555 0.17 +0.6 804,978 - BPHYT_RS03555 0.17 +6.4 805,175 + BPHYT_RS03555 0.24 +0.1 805,175 + BPHYT_RS03555 0.24 +2.2 805,181 + BPHYT_RS03555 0.24 -2.0 805,182 - BPHYT_RS03555 0.24 +5.2 805,208 + BPHYT_RS03555 0.25 +0.9 805,208 + BPHYT_RS03555 0.25 +0.4 805,208 + BPHYT_RS03555 0.25 +1.3 805,625 + BPHYT_RS03555 0.40 -2.9 805,631 - BPHYT_RS03555 0.40 +2.9 805,709 + BPHYT_RS03555 0.43 +1.2 805,710 - BPHYT_RS03555 0.43 +3.7 805,789 - BPHYT_RS03555 0.46 +4.0 805,881 + BPHYT_RS03555 0.49 +3.5 806,117 + BPHYT_RS03555 0.58 +3.8 806,118 - BPHYT_RS03555 0.58 +4.2 806,118 - BPHYT_RS03555 0.58 +4.6 806,589 - BPHYT_RS03555 0.75 +4.0 806,589 - BPHYT_RS03555 0.75 +3.4 806,589 - BPHYT_RS03555 0.75 +4.5 806,589 - BPHYT_RS03555 0.75 +4.7 806,621 + BPHYT_RS03555 0.76 +2.5 806,630 + BPHYT_RS03555 0.76 +4.6 806,630 + BPHYT_RS03555 0.76 +5.5 806,630 + BPHYT_RS03555 0.76 +4.7 806,631 - BPHYT_RS03555 0.76 +4.7 806,788 + BPHYT_RS03555 0.82 +4.8 807,035 + +3.5 807,100 - +4.2 807,165 - +4.7 807,173 + +4.3 807,178 + +4.2 807,178 + +4.8 807,244 + +4.4 807,244 + +5.5 807,583 + +0.1 807,584 - -1.1 807,584 - -0.0
Or see this region's nucleotide sequence