Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03105 and BPHYT_RS03110 are separated by 31 nucleotides BPHYT_RS03110 and BPHYT_RS03115 are separated by 125 nucleotides BPHYT_RS03115 and BPHYT_RS03120 are separated by 159 nucleotides
BPHYT_RS03105: BPHYT_RS03105 - DSBA oxidoreductase, at 694,600 to 696,195
_RS03105
BPHYT_RS03110: BPHYT_RS03110 - MarR family transcriptional regulator, at 696,227 to 696,736
_RS03110
BPHYT_RS03115: BPHYT_RS03115 - amino acid deaminase, at 696,862 to 698,139
_RS03115
BPHYT_RS03120: BPHYT_RS03120 - transcriptional regulator, at 698,299 to 699,189
_RS03120
Position (kb) 696
697
698
699 Strain fitness (log2 ratio) -2
-1
0
1
2 at 695.892 kb on + strand, within BPHYT_RS03105 at 695.892 kb on + strand, within BPHYT_RS03105 at 695.892 kb on + strand, within BPHYT_RS03105 at 695.893 kb on - strand, within BPHYT_RS03105 at 695.893 kb on - strand, within BPHYT_RS03105 at 695.896 kb on + strand, within BPHYT_RS03105 at 695.896 kb on + strand, within BPHYT_RS03105 at 695.897 kb on - strand, within BPHYT_RS03105 at 695.997 kb on + strand, within BPHYT_RS03105 at 696.529 kb on + strand at 696.530 kb on - strand, within BPHYT_RS03110 at 696.530 kb on - strand, within BPHYT_RS03110 at 696.897 kb on - strand at 697.013 kb on + strand, within BPHYT_RS03115 at 697.014 kb on - strand, within BPHYT_RS03115 at 697.014 kb on - strand, within BPHYT_RS03115 at 697.095 kb on - strand, within BPHYT_RS03115 at 697.148 kb on - strand, within BPHYT_RS03115 at 697.148 kb on - strand, within BPHYT_RS03115 at 697.190 kb on + strand, within BPHYT_RS03115 at 697.190 kb on + strand, within BPHYT_RS03115 at 697.190 kb on + strand, within BPHYT_RS03115 at 697.191 kb on - strand, within BPHYT_RS03115 at 697.191 kb on - strand, within BPHYT_RS03115 at 697.191 kb on - strand, within BPHYT_RS03115 at 697.280 kb on + strand, within BPHYT_RS03115 at 697.304 kb on + strand, within BPHYT_RS03115 at 697.331 kb on - strand, within BPHYT_RS03115 at 697.331 kb on - strand, within BPHYT_RS03115 at 697.379 kb on + strand, within BPHYT_RS03115 at 697.379 kb on + strand, within BPHYT_RS03115 at 697.515 kb on - strand, within BPHYT_RS03115 at 697.515 kb on - strand, within BPHYT_RS03115 at 697.515 kb on - strand, within BPHYT_RS03115 at 697.795 kb on - strand, within BPHYT_RS03115 at 698.097 kb on + strand at 698.100 kb on - strand at 698.230 kb on - strand at 698.290 kb on + strand at 698.306 kb on + strand at 698.307 kb on - strand at 698.498 kb on + strand, within BPHYT_RS03120 at 698.716 kb on + strand, within BPHYT_RS03120 at 698.717 kb on - strand, within BPHYT_RS03120 at 698.803 kb on + strand, within BPHYT_RS03120 at 698.874 kb on + strand, within BPHYT_RS03120 at 699.026 kb on - strand, within BPHYT_RS03120
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 695,892 + BPHYT_RS03105 0.81 -1.0 695,892 + BPHYT_RS03105 0.81 +0.0 695,892 + BPHYT_RS03105 0.81 -1.0 695,893 - BPHYT_RS03105 0.81 +1.0 695,893 - BPHYT_RS03105 0.81 -1.6 695,896 + BPHYT_RS03105 0.81 -1.6 695,896 + BPHYT_RS03105 0.81 +0.6 695,897 - BPHYT_RS03105 0.81 +1.7 695,997 + BPHYT_RS03105 0.88 +0.3 696,529 + -0.3 696,530 - BPHYT_RS03110 0.59 -0.9 696,530 - BPHYT_RS03110 0.59 -2.4 696,897 - -1.0 697,013 + BPHYT_RS03115 0.12 +0.2 697,014 - BPHYT_RS03115 0.12 -2.1 697,014 - BPHYT_RS03115 0.12 -0.3 697,095 - BPHYT_RS03115 0.18 -0.3 697,148 - BPHYT_RS03115 0.22 -0.5 697,148 - BPHYT_RS03115 0.22 +0.3 697,190 + BPHYT_RS03115 0.26 +0.6 697,190 + BPHYT_RS03115 0.26 +0.7 697,190 + BPHYT_RS03115 0.26 -1.9 697,191 - BPHYT_RS03115 0.26 -0.5 697,191 - BPHYT_RS03115 0.26 +0.6 697,191 - BPHYT_RS03115 0.26 -0.1 697,280 + BPHYT_RS03115 0.33 -0.4 697,304 + BPHYT_RS03115 0.35 -0.3 697,331 - BPHYT_RS03115 0.37 -0.3 697,331 - BPHYT_RS03115 0.37 -0.0 697,379 + BPHYT_RS03115 0.40 -1.1 697,379 + BPHYT_RS03115 0.40 +0.3 697,515 - BPHYT_RS03115 0.51 -0.9 697,515 - BPHYT_RS03115 0.51 +2.0 697,515 - BPHYT_RS03115 0.51 +0.0 697,795 - BPHYT_RS03115 0.73 -0.0 698,097 + +1.4 698,100 - +0.4 698,230 - -0.7 698,290 + +1.5 698,306 + -0.1 698,307 - -0.6 698,498 + BPHYT_RS03120 0.22 -0.3 698,716 + BPHYT_RS03120 0.47 -0.4 698,717 - BPHYT_RS03120 0.47 -0.6 698,803 + BPHYT_RS03120 0.57 -1.7 698,874 + BPHYT_RS03120 0.65 +0.6 699,026 - BPHYT_RS03120 0.82 +0.1
Or see this region's nucleotide sequence