Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01450 and BPHYT_RS01455 are separated by 244 nucleotides BPHYT_RS01455 and BPHYT_RS01460 are separated by 31 nucleotides BPHYT_RS01460 and BPHYT_RS01465 are separated by 114 nucleotides BPHYT_RS01465 and BPHYT_RS01470 are separated by 103 nucleotides
BPHYT_RS01450: BPHYT_RS01450 - DNA-binding protein, at 331,693 to 332,961
_RS01450
BPHYT_RS01455: BPHYT_RS01455 - peptide deformylase, at 333,206 to 333,709
_RS01455
BPHYT_RS01460: BPHYT_RS01460 - methionyl-tRNA formyltransferase, at 333,741 to 334,727
_RS01460
BPHYT_RS01465: BPHYT_RS01465 - lysine transporter LysE, at 334,842 to 335,486
_RS01465
BPHYT_RS01470: BPHYT_RS01470 - protease HtpX homolog, at 335,590 to 336,447
_RS01470
Position (kb) 333
334
335 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 332.807 kb on - strand, within BPHYT_RS01450 at 332.979 kb on - strand at 332.979 kb on - strand at 332.979 kb on - strand at 332.979 kb on - strand at 333.111 kb on + strand at 333.111 kb on + strand at 333.111 kb on + strand at 333.111 kb on + strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.112 kb on - strand at 333.213 kb on + strand at 333.644 kb on + strand, within BPHYT_RS01455 at 333.707 kb on + strand at 333.707 kb on + strand at 333.707 kb on + strand at 333.707 kb on + strand at 334.725 kb on + strand at 334.725 kb on + strand at 334.726 kb on - strand at 334.802 kb on + strand at 334.813 kb on - strand at 334.920 kb on + strand, within BPHYT_RS01465 at 334.920 kb on + strand, within BPHYT_RS01465 at 334.920 kb on + strand, within BPHYT_RS01465 at 334.921 kb on - strand, within BPHYT_RS01465 at 334.921 kb on - strand, within BPHYT_RS01465 at 334.921 kb on - strand, within BPHYT_RS01465 at 334.921 kb on - strand, within BPHYT_RS01465 at 334.921 kb on - strand, within BPHYT_RS01465 at 334.921 kb on - strand, within BPHYT_RS01465 at 334.922 kb on + strand, within BPHYT_RS01465 at 334.922 kb on + strand, within BPHYT_RS01465 at 334.923 kb on - strand, within BPHYT_RS01465 at 334.923 kb on - strand, within BPHYT_RS01465 at 334.923 kb on - strand, within BPHYT_RS01465 at 334.923 kb on - strand, within BPHYT_RS01465 at 334.923 kb on - strand, within BPHYT_RS01465 at 334.923 kb on - strand, within BPHYT_RS01465 at 335.060 kb on + strand, within BPHYT_RS01465 at 335.060 kb on + strand, within BPHYT_RS01465 at 335.084 kb on + strand, within BPHYT_RS01465 at 335.085 kb on - strand, within BPHYT_RS01465 at 335.089 kb on - strand, within BPHYT_RS01465 at 335.089 kb on - strand, within BPHYT_RS01465 at 335.089 kb on - strand, within BPHYT_RS01465 at 335.098 kb on - strand, within BPHYT_RS01465 at 335.098 kb on - strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.236 kb on + strand, within BPHYT_RS01465 at 335.237 kb on - strand, within BPHYT_RS01465 at 335.237 kb on - strand, within BPHYT_RS01465 at 335.237 kb on - strand, within BPHYT_RS01465 at 335.513 kb on + strand at 335.514 kb on - strand at 335.520 kb on + strand at 335.520 kb on + strand at 335.520 kb on + strand at 335.525 kb on + strand at 335.526 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 332,807 - BPHYT_RS01450 0.88 +0.0 332,979 - +0.2 332,979 - -0.3 332,979 - -0.2 332,979 - +0.3 333,111 + +0.6 333,111 + -0.0 333,111 + +0.1 333,111 + +1.7 333,112 - -0.7 333,112 - -2.2 333,112 - -0.5 333,112 - -2.6 333,112 - -0.8 333,112 - -0.3 333,112 - -1.4 333,112 - -0.6 333,112 - +0.9 333,213 + -0.6 333,644 + BPHYT_RS01455 0.87 +3.1 333,707 + -0.4 333,707 + -1.2 333,707 + -2.0 333,707 + -1.8 334,725 + +0.4 334,725 + -0.2 334,726 - +0.6 334,802 + +0.1 334,813 - +0.2 334,920 + BPHYT_RS01465 0.12 +2.5 334,920 + BPHYT_RS01465 0.12 +1.1 334,920 + BPHYT_RS01465 0.12 -0.1 334,921 - BPHYT_RS01465 0.12 +3.7 334,921 - BPHYT_RS01465 0.12 +0.6 334,921 - BPHYT_RS01465 0.12 +1.2 334,921 - BPHYT_RS01465 0.12 +1.1 334,921 - BPHYT_RS01465 0.12 +1.0 334,921 - BPHYT_RS01465 0.12 +1.1 334,922 + BPHYT_RS01465 0.12 +0.2 334,922 + BPHYT_RS01465 0.12 +2.9 334,923 - BPHYT_RS01465 0.13 +1.0 334,923 - BPHYT_RS01465 0.13 +1.2 334,923 - BPHYT_RS01465 0.13 +0.6 334,923 - BPHYT_RS01465 0.13 +1.5 334,923 - BPHYT_RS01465 0.13 +1.3 334,923 - BPHYT_RS01465 0.13 +0.8 335,060 + BPHYT_RS01465 0.34 +1.1 335,060 + BPHYT_RS01465 0.34 +1.1 335,084 + BPHYT_RS01465 0.38 -0.2 335,085 - BPHYT_RS01465 0.38 +1.9 335,089 - BPHYT_RS01465 0.38 +0.0 335,089 - BPHYT_RS01465 0.38 +1.0 335,089 - BPHYT_RS01465 0.38 +1.5 335,098 - BPHYT_RS01465 0.40 +1.2 335,098 - BPHYT_RS01465 0.40 -0.1 335,236 + BPHYT_RS01465 0.61 +1.9 335,236 + BPHYT_RS01465 0.61 -0.8 335,236 + BPHYT_RS01465 0.61 +2.2 335,236 + BPHYT_RS01465 0.61 +1.0 335,236 + BPHYT_RS01465 0.61 +2.4 335,236 + BPHYT_RS01465 0.61 +1.3 335,236 + BPHYT_RS01465 0.61 +0.6 335,236 + BPHYT_RS01465 0.61 +0.7 335,237 - BPHYT_RS01465 0.61 +1.9 335,237 - BPHYT_RS01465 0.61 +1.1 335,237 - BPHYT_RS01465 0.61 +1.2 335,513 + -0.5 335,514 - -2.3 335,520 + -1.0 335,520 + -1.1 335,520 + -1.0 335,525 + -0.2 335,526 - +0.4
Or see this region's nucleotide sequence