Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00055

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Deoxyribonucleic from herring sperm 10 mg/mL (C)
14,937	+				-0.3
15,244	+		BPHYT_RS00050	0.39	-0.3
15,289	-		BPHYT_RS00050	0.45	-1.2
15,327	+		BPHYT_RS00050	0.50	+0.0
15,585	+		BPHYT_RS00050	0.85	-2.5
15,585	+		BPHYT_RS00050	0.85	-1.2
15,585	+		BPHYT_RS00050	0.85	+0.1
15,585	+		BPHYT_RS00050	0.85	-0.6
15,664	-				+0.8
15,673	-				+0.1
15,723	+				-0.2
15,723	+				+0.1
15,724	-				+1.2
15,794	+		BPHYT_RS00055	0.12	+1.9
15,795	-		BPHYT_RS00055	0.12	-0.2
16,052	-				-1.8
16,187	+				+0.1
16,277	+				+1.4
16,278	-				-0.8
16,278	-				+0.5
16,310	+				-0.6
16,311	-				-0.4
16,311	-				-0.1
16,319	+				+0.1
16,346	+				-0.1
16,346	+				-1.9
16,359	-				-0.3
16,469	-		BPHYT_RS00060	0.12	-0.6
16,524	-		BPHYT_RS00060	0.14	-0.4
16,553	+		BPHYT_RS00060	0.15	+0.6
16,553	+		BPHYT_RS00060	0.15	-0.1
16,679	+		BPHYT_RS00060	0.20	-1.0
16,680	-		BPHYT_RS00060	0.20	-0.2
16,680	-		BPHYT_RS00060	0.20	+0.1
16,795	+		BPHYT_RS00060	0.24	-0.1
16,796	-		BPHYT_RS00060	0.24	-0.5
16,798	-		BPHYT_RS00060	0.24	-0.4
16,798	-		BPHYT_RS00060	0.24	+0.2
16,798	-		BPHYT_RS00060	0.24	-0.1
16,973	+		BPHYT_RS00060	0.30	-0.5
16,973	+		BPHYT_RS00060	0.30	+0.1
16,973	+		BPHYT_RS00060	0.30	+1.2
16,974	-		BPHYT_RS00060	0.30	-0.4
16,974	-		BPHYT_RS00060	0.30	-0.2
16,974	-		BPHYT_RS00060	0.30	-1.9
16,977	+		BPHYT_RS00060	0.30	-1.4