Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.5020.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
4,755,093	+				-0.2
4,755,093	+				+1.3
4,755,093	+				-0.3
4,755,093	+				-0.7
4,755,093	+				-0.9
4,755,093	+				-0.7
4,755,093	+				+0.3
4,755,093	+				+0.8
4,755,094	-				-0.9
4,755,094	-				-2.8
4,755,094	-				-0.0
4,755,094	-				-0.6
4,755,094	-				-0.2
4,755,094	-				-2.2
4,755,113	+				+0.9
4,755,113	+				-0.9
4,755,163	-				-0.8
4,755,163	-				-0.9
4,755,163	-				-2.0
4,755,163	-				+0.3
4,755,213	+				+1.3
4,755,214	-				-0.7
4,755,518	+		Xcc-8004.5018.1	0.48	+1.0
4,755,518	+		Xcc-8004.5018.1	0.48	-1.0
4,755,518	+		Xcc-8004.5018.1	0.48	-0.5
4,755,518	+		Xcc-8004.5018.1	0.48	-2.3
4,755,518	+		Xcc-8004.5018.1	0.48	-0.4
4,755,518	+		Xcc-8004.5018.1	0.48	-0.1
4,755,518	+		Xcc-8004.5018.1	0.48	+0.7
4,755,519	-		Xcc-8004.5018.1	0.48	-0.2
4,755,654	-				-1.0
4,755,674	+		Xcc-8004.5019.1	0.12	+1.0
4,755,675	-		Xcc-8004.5019.1	0.12	+0.1
4,755,675	-		Xcc-8004.5019.1	0.12	-0.5
4,756,043	+				-1.5
4,756,187	+		Xcc-8004.5020.1	0.22	-2.1
4,756,187	+		Xcc-8004.5020.1	0.22	-1.6
4,756,188	-		Xcc-8004.5020.1	0.22	+0.1
4,756,325	+		Xcc-8004.5020.1	0.38	-1.6
4,756,498	+		Xcc-8004.5020.1	0.59	-2.2
4,756,498	+		Xcc-8004.5020.1	0.59	-2.5
4,756,499	-		Xcc-8004.5020.1	0.59	-2.3
4,756,745	+		Xcc-8004.5020.1	0.88	-0.9
4,756,745	+		Xcc-8004.5020.1	0.88	-1.7
4,756,746	-		Xcc-8004.5020.1	0.88	-3.5
4,756,746	-		Xcc-8004.5020.1	0.88	-2.7
4,756,746	-		Xcc-8004.5020.1	0.88	-2.5
4,756,746	-		Xcc-8004.5020.1	0.88	-2.3
4,756,746	-		Xcc-8004.5020.1	0.88	-2.7
4,756,833	-				-1.2
4,756,841	-				-1.9
4,756,869	+				+0.4
4,756,869	+				+1.0
4,756,869	+				-2.0
4,756,869	+				+0.7
4,756,869	+				-0.4
4,756,870	-				-1.6
4,756,870	-				+0.3
4,756,870	-				-0.5
4,756,941	+				+0.7
4,756,941	+				+0.6
4,756,942	-				-0.7
4,756,942	-				-0.2
4,756,942	-				+0.1
4,757,255	+		Xcc-8004.5021.1	0.40	+0.3
4,757,529	+		Xcc-8004.5021.1	0.71	-1.3
4,757,530	-		Xcc-8004.5021.1	0.71	+0.7
4,757,732	-				+0.4
4,757,732	-				-0.8
4,757,735	+				-0.2
4,757,735	+				+0.3
4,757,736	-				+0.3
4,757,736	-				+0.2
4,757,757	+				+0.0
4,757,757	+				+0.1
4,757,757	+				-0.0
4,757,757	+				-0.5
4,757,757	+				+0.7
4,757,757	+				+0.7
4,757,758	-				+0.1
4,757,758	-				-0.0
4,757,758	-				-0.2
4,757,758	-				+0.3