Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.4762.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
4,531,091	-				+1.1
4,531,091	-				+0.7
4,531,091	-				-0.9
4,531,136	+				-0.4
4,531,136	+				+0.1
4,531,136	+				-0.4
4,531,136	+				-0.0
4,531,136	+				+0.5
4,531,136	+				+0.1
4,531,136	+				+0.1
4,531,137	-				+0.8
4,531,137	-				+0.9
4,531,137	-				-0.6
4,531,137	-				+0.7
4,531,137	-				-0.7
4,531,141	+				+0.3
4,531,141	+				-1.5
4,531,141	+				-0.4
4,531,141	+				-0.7
4,531,141	+				-0.5
4,531,142	-				+1.3
4,531,142	-				-0.9
4,531,142	-				+0.8
4,531,142	-				+0.2
4,531,142	-				-0.0
4,531,142	-				+0.0
4,531,142	-				+0.1
4,531,439	-				-0.0
4,531,439	-				-0.3
4,531,628	+		Xcc-8004.4761.1	0.31	+0.6
4,531,629	-		Xcc-8004.4761.1	0.31	+0.1
4,531,629	-		Xcc-8004.4761.1	0.31	-1.1
4,531,629	-		Xcc-8004.4761.1	0.31	+0.5
4,531,629	-		Xcc-8004.4761.1	0.31	+0.8
4,531,655	+		Xcc-8004.4761.1	0.35	-0.9
4,531,655	+		Xcc-8004.4761.1	0.35	-1.0
4,531,655	+		Xcc-8004.4761.1	0.35	-0.7
4,531,826	+		Xcc-8004.4761.1	0.64	+0.2
4,532,031	+				-0.1
4,532,031	+				-0.9
4,532,031	+				-0.3
4,532,031	+				+0.3
4,532,031	+				+0.1
4,532,031	+				-1.0
4,532,031	+				+0.2
4,532,032	-				-1.0
4,532,032	-				+0.4
4,532,032	-				-0.1
4,532,032	-				+0.5
4,532,032	-				-0.8
4,532,032	-				+0.9
4,532,130	+				-0.1
4,532,131	-				-0.9
4,532,139	+		Xcc-8004.4762.1	0.10	-2.3
4,532,139	+		Xcc-8004.4762.1	0.10	+0.2
4,532,139	+		Xcc-8004.4762.1	0.10	-1.3
4,532,139	+		Xcc-8004.4762.1	0.10	+0.2
4,532,140	-		Xcc-8004.4762.1	0.10	-1.4
4,532,140	-		Xcc-8004.4762.1	0.10	-0.4
4,532,140	-		Xcc-8004.4762.1	0.10	-0.6
4,532,140	-		Xcc-8004.4762.1	0.10	+0.7
4,532,140	-		Xcc-8004.4762.1	0.10	+0.8
4,532,246	+		Xcc-8004.4762.1	0.20	-2.0
4,532,247	-		Xcc-8004.4762.1	0.20	-1.0
4,532,247	-		Xcc-8004.4762.1	0.20	+0.3
4,532,709	+		Xcc-8004.4762.1	0.64	-0.5
4,532,709	+		Xcc-8004.4762.1	0.64	+0.1
4,532,710	-		Xcc-8004.4762.1	0.64	-0.3
4,532,710	-		Xcc-8004.4762.1	0.64	-0.7
4,533,080	+				+1.4
4,533,080	+				-0.9
4,533,080	+				+1.3
4,533,080	+				+0.9
4,533,081	-				+0.2
4,533,081	-				-0.1
4,533,081	-				+0.0
4,533,081	-				-0.3
4,533,081	-				-0.3
4,533,081	-				+0.0
4,533,081	-				-1.0
4,533,081	-				-0.9
4,533,115	+				-0.3
4,533,164	+				+1.2
4,533,164	+				+0.3
4,533,165	-				-0.0
4,533,165	-				+0.5
4,533,373	+				+0.4
4,533,374	-				+0.7
4,533,387	-				-0.3
4,533,406	-				-0.2
4,533,436	+				+1.0
4,533,437	-				+1.0
4,533,437	-				+0.1
4,533,447	+				-0.0
4,533,447	+				+0.3
4,533,536	+				-0.5
4,533,536	+				-0.2
4,533,536	+				-1.5
4,533,537	-				-0.1
4,533,537	-				+1.0
4,533,537	-				+0.2
4,533,537	-				-0.7
4,533,537	-				+0.5
4,533,537	-				-0.2
4,533,537	-				-1.8