Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.4437.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
4,250,265	+				-0.5
4,250,265	+				-0.6
4,250,266	-				-1.0
4,250,266	-				-1.0
4,250,266	-				+0.1
4,250,637	+				-1.2
4,250,637	+				-1.4
4,250,637	+				+0.2
4,250,638	-				+0.2
4,250,638	-				+0.5
4,250,638	-				-0.3
4,250,737	-				-0.5
4,250,788	+				-0.6
4,250,788	+				+0.0
4,250,788	+				+0.5
4,250,788	+				+0.4
4,250,789	-				+0.2
4,250,807	-				-0.3
4,250,816	+				-0.5
4,250,816	+				+1.7
4,250,816	+				+0.2
4,250,817	-				+1.2
4,250,817	-				-0.1
4,250,817	-				+0.2
4,250,817	-				+0.8
4,250,817	-				+0.4
4,250,817	-				-0.2
4,250,817	-				-0.2
4,250,817	-				-1.5
4,250,817	-				+0.2
4,250,817	-				-1.4
4,250,817	-				+0.1
4,250,817	-				-0.4
4,250,834	+				-0.0
4,250,914	+				+0.6
4,250,914	+				+0.6
4,250,914	+				+0.1
4,250,914	+				+0.2
4,250,915	-				-1.9
4,250,915	-				+0.7
4,250,951	+				-0.5
4,250,951	+				-0.6
4,250,952	-				+0.1
4,250,952	-				+1.2
4,250,952	-				+0.5
4,250,952	-				-1.1
4,250,952	-				-0.5
4,250,952	-				+0.2
4,250,952	-				-0.6
4,250,952	-				+0.7
4,250,952	-				-1.2
4,250,985	+				-0.2
4,250,986	-				-0.6
4,251,241	+		Xcc-8004.4437.1	0.52	-0.8
4,251,241	+		Xcc-8004.4437.1	0.52	+0.4
4,251,241	+		Xcc-8004.4437.1	0.52	+0.3
4,251,241	+		Xcc-8004.4437.1	0.52	+0.1
4,251,241	+		Xcc-8004.4437.1	0.52	+0.1
4,251,241	+		Xcc-8004.4437.1	0.52	-1.2
4,251,241	+		Xcc-8004.4437.1	0.52	-0.1
4,251,241	+		Xcc-8004.4437.1	0.52	-0.5
4,251,241	+		Xcc-8004.4437.1	0.52	+1.2
4,251,241	+		Xcc-8004.4437.1	0.52	-1.4
4,251,241	+		Xcc-8004.4437.1	0.52	+1.2
4,251,241	+		Xcc-8004.4437.1	0.52	-0.6
4,251,242	-		Xcc-8004.4437.1	0.53	+2.5
4,251,242	-		Xcc-8004.4437.1	0.53	-0.5
4,251,242	-		Xcc-8004.4437.1	0.53	+0.4
4,251,242	-		Xcc-8004.4437.1	0.53	+0.6
4,251,242	-		Xcc-8004.4437.1	0.53	+0.3
4,251,242	-		Xcc-8004.4437.1	0.53	-0.2
4,251,242	-		Xcc-8004.4437.1	0.53	+0.1
4,251,242	-		Xcc-8004.4437.1	0.53	-0.6
4,251,242	-		Xcc-8004.4437.1	0.53	-1.3
4,251,242	-		Xcc-8004.4437.1	0.53	+0.3
4,251,242	-		Xcc-8004.4437.1	0.53	-0.4
4,251,461	-				-0.4
4,251,468	-				+0.6
4,251,503	+				-0.6
4,251,503	+				-1.8
4,251,504	-				-0.7
4,251,504	-				-0.5
4,251,504	-				-1.3
4,251,528	+				+0.6
4,251,529	-				-0.2
4,251,532	+				+0.4
4,251,532	+				-0.3
4,251,532	+				+0.8
4,251,532	+				+1.0
4,251,533	-				-1.0
4,251,533	-				-1.6
4,251,533	-				-0.3
4,251,533	-				+1.7
4,251,545	+				-0.9
4,251,559	+				-0.3
4,251,629	+				+1.2
4,251,631	+				+1.5
4,251,635	-				+0.0
4,251,644	+				+0.1
4,251,648	+				-0.3
4,251,662	+				+0.1
4,251,670	+				-1.1
4,251,683	-				+0.1
4,251,698	-				-0.2
4,251,929	-				-0.6
4,251,966	+				+0.4