Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.4238.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
4,061,691	+				+0.9
4,061,691	+				+0.3
4,061,691	+				-1.2
4,061,691	+				+0.1
4,061,691	+				-1.4
4,061,691	+				+0.5
4,061,691	+				-0.6
4,061,691	+				+1.0
4,061,692	-				+0.0
4,061,692	-				-0.4
4,061,692	-				-0.2
4,061,700	-				+0.7
4,061,700	-				+2.2
4,062,013	-		Xcc-8004.4237.1	0.46	-0.8
4,062,013	-		Xcc-8004.4237.1	0.46	+0.3
4,062,013	-		Xcc-8004.4237.1	0.46	+0.5
4,062,158	+		Xcc-8004.4237.1	0.66	-0.2
4,062,158	+		Xcc-8004.4237.1	0.66	+0.3
4,062,184	-		Xcc-8004.4237.1	0.69	-1.8
4,062,274	+		Xcc-8004.4237.1	0.81	-0.6
4,062,275	-		Xcc-8004.4237.1	0.81	+0.2
4,062,661	+		Xcc-8004.4238.1	0.13	-0.1
4,062,671	-		Xcc-8004.4238.1	0.14	+0.1
4,062,671	-		Xcc-8004.4238.1	0.14	+0.2
4,062,671	-		Xcc-8004.4238.1	0.14	+0.3
4,062,784	+		Xcc-8004.4238.1	0.26	-2.6
4,062,784	+		Xcc-8004.4238.1	0.26	-0.4
4,062,784	+		Xcc-8004.4238.1	0.26	-0.7
4,062,784	+		Xcc-8004.4238.1	0.26	+0.2
4,062,784	+		Xcc-8004.4238.1	0.26	+1.2
4,062,785	-		Xcc-8004.4238.1	0.27	-0.7
4,062,787	+		Xcc-8004.4238.1	0.27	-0.1
4,062,787	+		Xcc-8004.4238.1	0.27	-0.4
4,062,787	+		Xcc-8004.4238.1	0.27	+1.3
4,062,787	+		Xcc-8004.4238.1	0.27	+0.9
4,062,787	+		Xcc-8004.4238.1	0.27	+0.2
4,062,787	+		Xcc-8004.4238.1	0.27	+0.2
4,062,788	-		Xcc-8004.4238.1	0.27	+1.3
4,062,788	-		Xcc-8004.4238.1	0.27	-0.5
4,062,788	-		Xcc-8004.4238.1	0.27	+0.3
4,062,788	-		Xcc-8004.4238.1	0.27	-1.4
4,063,063	+		Xcc-8004.4238.1	0.56	+0.8
4,063,063	+		Xcc-8004.4238.1	0.56	-0.1
4,063,063	+		Xcc-8004.4238.1	0.56	+0.7
4,063,064	-		Xcc-8004.4238.1	0.57	-0.6
4,063,064	-		Xcc-8004.4238.1	0.57	+1.2
4,063,064	-		Xcc-8004.4238.1	0.57	-0.9
4,063,064	-		Xcc-8004.4238.1	0.57	+0.5
4,063,163	+		Xcc-8004.4238.1	0.67	+0.6
4,063,163	+		Xcc-8004.4238.1	0.67	-0.3
4,063,163	+		Xcc-8004.4238.1	0.67	+0.5
4,063,164	-		Xcc-8004.4238.1	0.67	-2.3
4,063,164	-		Xcc-8004.4238.1	0.67	+1.3
4,063,358	-		Xcc-8004.4238.1	0.88	+0.7
4,063,358	-		Xcc-8004.4238.1	0.88	+0.9
4,063,358	-		Xcc-8004.4238.1	0.88	-0.9
4,063,495	+				+0.2
4,063,495	+				-1.0
4,063,531	+				-0.5
4,063,531	+				+0.8
4,063,531	+				-0.5
4,063,531	+				-0.9
4,063,531	+				+0.4
4,063,531	+				-0.3
4,063,531	+				-0.8
4,063,531	+				+1.0
4,063,531	+				-1.6
4,063,531	+				+0.4
4,063,531	+				+1.4
4,063,531	+				-0.6
4,063,531	+				-1.2
4,063,531	+				+0.2
4,063,531	+				-0.2
4,063,531	+				+0.2
4,063,532	-				-0.2
4,063,532	-				-0.1
4,063,532	-				+0.3
4,063,532	-				+0.4
4,063,532	-				-2.1
4,063,532	-				+0.3
4,063,532	-				-0.6
4,063,532	-				+0.3
4,063,532	-				+0.3
4,063,532	-				-1.0
4,063,532	-				-0.9
4,063,532	-				+0.2
4,063,546	-				-0.6
4,063,546	-				+0.8
4,063,664	+		Xcc-8004.4239.1	0.38	-0.5
4,063,664	+		Xcc-8004.4239.1	0.38	+0.8
4,063,664	+		Xcc-8004.4239.1	0.38	-0.4
4,063,665	-		Xcc-8004.4239.1	0.38	-0.0
4,063,665	-		Xcc-8004.4239.1	0.38	-0.7
4,063,665	-		Xcc-8004.4239.1	0.38	-0.7
4,063,665	-		Xcc-8004.4239.1	0.38	+0.6
4,063,924	+				+0.9
4,063,924	+				+0.2
4,063,924	+				-1.3
4,063,925	-				-0.4
4,063,969	+				+0.8
4,063,970	-				-0.9
4,063,970	-				-0.6
4,063,970	-				-0.1
4,064,318	-				-1.1
4,064,318	-				+0.2
4,064,318	-				-0.2
4,064,428	+		Xcc-8004.4241.1	0.12	+0.4
4,064,428	+		Xcc-8004.4241.1	0.12	-0.6