Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3303.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
3,204,329	-				+0.7
3,204,427	+				+1.7
3,204,428	-				+0.2
3,204,428	-				+1.0
3,204,428	-				-0.3
3,204,428	-				-0.3
3,204,459	+				-0.3
3,204,813	+		Xcc-8004.3303.1	0.25	-0.1
3,204,813	+		Xcc-8004.3303.1	0.25	-0.9
3,204,813	+		Xcc-8004.3303.1	0.25	-1.6
3,204,813	+		Xcc-8004.3303.1	0.25	-0.0
3,204,814	-		Xcc-8004.3303.1	0.25	-1.3
3,204,814	-		Xcc-8004.3303.1	0.25	-1.3
3,204,814	-		Xcc-8004.3303.1	0.25	-1.1
3,204,814	-		Xcc-8004.3303.1	0.25	-1.1
3,204,814	-		Xcc-8004.3303.1	0.25	-0.8
3,205,602	+				-0.3
3,205,602	+				-0.2
3,205,602	+				+0.4
3,205,602	+				-0.1
3,205,603	-				+1.1
3,205,603	-				-0.1
3,205,603	-				+0.3
3,205,603	-				-0.4
3,205,812	+		Xcc-8004.3304.1	0.25	+1.7
3,205,813	-		Xcc-8004.3304.1	0.25	+0.4
3,206,408	+				+0.0
3,206,408	+				+0.0
3,206,409	-				+2.5