Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3050.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
2,982,915	-		Xcc-8004.3049.1	0.36	-1.6
2,982,915	-		Xcc-8004.3049.1	0.36	-1.9
2,982,944	+		Xcc-8004.3049.1	0.37	-1.1
2,982,944	+		Xcc-8004.3049.1	0.37	+0.1
2,982,944	+		Xcc-8004.3049.1	0.37	-2.4
2,982,944	+		Xcc-8004.3049.1	0.37	-1.6
2,982,944	+		Xcc-8004.3049.1	0.37	-0.2
2,982,944	+		Xcc-8004.3049.1	0.37	+1.7
2,982,945	-		Xcc-8004.3049.1	0.38	-2.2
2,982,945	-		Xcc-8004.3049.1	0.38	+0.7
2,982,945	-		Xcc-8004.3049.1	0.38	-2.0
2,982,945	-		Xcc-8004.3049.1	0.38	-0.9
2,982,982	-		Xcc-8004.3049.1	0.40	-1.1
2,982,982	-		Xcc-8004.3049.1	0.40	-0.9
2,982,982	-		Xcc-8004.3049.1	0.40	+0.7
2,983,145	+		Xcc-8004.3049.1	0.51	+0.1
2,983,238	+		Xcc-8004.3049.1	0.57	-1.1
2,983,238	+		Xcc-8004.3049.1	0.57	-1.6
2,983,565	+		Xcc-8004.3049.1	0.78	-1.1
2,983,566	-		Xcc-8004.3049.1	0.79	-0.9
2,983,566	-		Xcc-8004.3049.1	0.79	-1.3
2,983,566	-		Xcc-8004.3049.1	0.79	-1.1
2,983,566	-		Xcc-8004.3049.1	0.79	-2.2
2,983,566	-		Xcc-8004.3049.1	0.79	+0.1
2,983,566	-		Xcc-8004.3049.1	0.79	-2.9
2,983,736	+		Xcc-8004.3049.1	0.90	-0.6
2,983,736	+		Xcc-8004.3049.1	0.90	+1.1
2,983,737	-		Xcc-8004.3049.1	0.90	-1.1
2,983,737	-		Xcc-8004.3049.1	0.90	-1.0
2,983,737	-		Xcc-8004.3049.1	0.90	+0.7
2,983,760	+				-0.3
2,983,784	+				+1.1
2,983,785	-				-0.4
2,983,785	-				-0.6