Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.2940.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
2,862,050	+				+0.6
2,862,781	+				-0.2
2,862,781	+				+0.2
2,862,781	+				-0.1
2,862,781	+				+0.3
2,862,782	-				-0.3
2,862,782	-				+0.6
2,862,782	-				+0.1
2,862,916	+				+1.2
2,862,916	+				+0.1
2,862,916	+				-0.0
2,862,916	+				-0.5
2,862,916	+				-0.0
2,862,917	-				+0.0
2,862,917	-				+0.5
2,862,917	-				+0.5
2,862,917	-				+0.8
2,862,959	+				+0.7
2,863,011	-				+0.1
2,863,058	+				+0.4
2,863,058	+				-0.4
2,863,058	+				-0.3
2,863,058	+				+0.1
2,863,058	+				-1.7
2,863,059	-				+1.2
2,863,059	-				-0.1
2,863,059	-				+0.8
2,863,062	+				-0.1
2,863,062	+				+1.2
2,863,062	+				-1.1
2,863,062	+				-2.0
2,863,062	+				-0.6
2,863,062	+				+0.5
2,863,063	-				-0.1
2,863,063	-				+0.1
2,863,105	+				-0.3
2,863,106	+				+0.6
2,863,106	+				+0.1
2,863,106	+				+0.5
2,863,107	-		Xcc-8004.2940.1	0.10	-0.3
2,863,107	-		Xcc-8004.2940.1	0.10	-0.6
2,863,107	-		Xcc-8004.2940.1	0.10	-0.4
2,863,358	+		Xcc-8004.2940.1	0.31	-0.1
2,863,358	+		Xcc-8004.2940.1	0.31	-0.4
2,863,358	+		Xcc-8004.2940.1	0.31	+0.4
2,863,358	+		Xcc-8004.2940.1	0.31	+0.9
2,863,358	+		Xcc-8004.2940.1	0.31	+0.1
2,863,359	-		Xcc-8004.2940.1	0.31	-2.9
2,863,359	-		Xcc-8004.2940.1	0.31	+0.4
2,863,359	-		Xcc-8004.2940.1	0.31	-1.4
2,863,359	-		Xcc-8004.2940.1	0.31	-0.6
2,863,359	-		Xcc-8004.2940.1	0.31	+0.0
2,863,359	-		Xcc-8004.2940.1	0.31	+0.3
2,863,359	-		Xcc-8004.2940.1	0.31	+0.4
2,863,415	+		Xcc-8004.2940.1	0.36	+0.6
2,863,506	-		Xcc-8004.2940.1	0.43	+0.1
2,863,523	+		Xcc-8004.2940.1	0.45	-0.1
2,863,523	+		Xcc-8004.2940.1	0.45	-0.9
2,863,523	+		Xcc-8004.2940.1	0.45	+0.3
2,863,524	-		Xcc-8004.2940.1	0.45	+0.2
2,863,559	-		Xcc-8004.2940.1	0.48	+1.3
2,863,631	+		Xcc-8004.2940.1	0.54	+0.1
2,863,631	+		Xcc-8004.2940.1	0.54	-0.6
2,863,631	+		Xcc-8004.2940.1	0.54	-0.0
2,863,631	+		Xcc-8004.2940.1	0.54	+0.9
2,863,631	+		Xcc-8004.2940.1	0.54	-0.2
2,863,632	-		Xcc-8004.2940.1	0.54	+0.0
2,863,632	-		Xcc-8004.2940.1	0.54	+0.5
2,863,632	-		Xcc-8004.2940.1	0.54	-0.4
2,863,632	-		Xcc-8004.2940.1	0.54	+0.1
2,863,739	+		Xcc-8004.2940.1	0.63	-0.1
2,863,740	-		Xcc-8004.2940.1	0.63	-0.6
2,863,847	+		Xcc-8004.2940.1	0.72	-0.6
2,863,847	+		Xcc-8004.2940.1	0.72	+0.8
2,863,848	-		Xcc-8004.2940.1	0.72	-0.2
2,863,848	-		Xcc-8004.2940.1	0.72	+0.3
2,864,051	+		Xcc-8004.2940.1	0.89	-0.5
2,864,051	+		Xcc-8004.2940.1	0.89	+0.1
2,864,052	-		Xcc-8004.2940.1	0.89	-1.8
2,864,052	-		Xcc-8004.2940.1	0.89	+0.9
2,864,057	+		Xcc-8004.2940.1	0.89	-0.7
2,864,058	-		Xcc-8004.2940.1	0.89	-0.9
2,864,242	+				-0.4
2,864,242	+				+2.1
2,864,243	-				+0.4
2,864,243	-				+0.6
2,864,243	-				+0.2
2,864,243	-				-1.2
2,864,404	+				-1.2
2,864,404	+				+0.7
2,864,404	+				+0.1
2,864,404	+				+0.9
2,864,404	+				-0.2
2,864,404	+				+0.0
2,864,404	+				+0.0
2,864,405	-				+1.5
2,864,459	+				-0.3
2,864,502	+				-0.3
2,864,502	+				-0.2
2,864,502	+				-0.8
2,864,502	+				+0.1
2,864,502	+				+0.4
2,864,502	+				-0.8
2,864,502	+				-0.3
2,864,502	+				+0.1
2,864,502	+				+0.4
2,864,502	+				-0.0
2,864,503	-				-0.3
2,864,503	-				-0.9
2,864,540	-		Xcc-8004.2941.1	0.10	-1.8
2,864,540	-		Xcc-8004.2941.1	0.10	-1.7
2,864,707	+		Xcc-8004.2941.1	0.21	+1.3
2,864,707	+		Xcc-8004.2941.1	0.21	+0.9
2,864,779	+		Xcc-8004.2941.1	0.25	+0.4
2,864,779	+		Xcc-8004.2941.1	0.25	-1.3
2,864,791	+		Xcc-8004.2941.1	0.26	-0.6
2,864,791	+		Xcc-8004.2941.1	0.26	+0.9
2,864,792	-		Xcc-8004.2941.1	0.26	+0.6
2,864,792	-		Xcc-8004.2941.1	0.26	-1.3
2,864,808	+		Xcc-8004.2941.1	0.27	+0.5
2,864,809	-		Xcc-8004.2941.1	0.27	-0.3
2,864,824	+		Xcc-8004.2941.1	0.28	+0.2
2,864,920	+		Xcc-8004.2941.1	0.34	-0.3
2,864,920	+		Xcc-8004.2941.1	0.34	+0.1
2,864,921	-		Xcc-8004.2941.1	0.34	-1.3
2,864,921	-		Xcc-8004.2941.1	0.34	+0.8
2,864,921	-		Xcc-8004.2941.1	0.34	+0.1
2,864,921	-		Xcc-8004.2941.1	0.34	-0.8
2,865,102	-		Xcc-8004.2941.1	0.46	+0.8
2,865,148	+		Xcc-8004.2941.1	0.48	-0.9
2,865,148	+		Xcc-8004.2941.1	0.48	-0.5
2,865,149	-		Xcc-8004.2941.1	0.49	+0.3
2,865,149	-		Xcc-8004.2941.1	0.49	-0.4
2,865,149	-		Xcc-8004.2941.1	0.49	+0.4