Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1763.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
1,692,000	+				+1.6
1,692,001	-				+0.9
1,692,183	-				+1.2
1,692,183	-				-0.2
1,692,183	-				-0.1
1,692,638	+		Xcc-8004.1762.1	0.64	-0.5
1,692,638	+		Xcc-8004.1762.1	0.64	-1.7
1,692,638	+		Xcc-8004.1762.1	0.64	+0.8
1,692,638	+		Xcc-8004.1762.1	0.64	-1.1
1,692,638	+		Xcc-8004.1762.1	0.64	-1.2
1,692,639	-		Xcc-8004.1762.1	0.64	-0.6
1,692,639	-		Xcc-8004.1762.1	0.64	-0.1
1,692,639	-		Xcc-8004.1762.1	0.64	+0.2
1,692,639	-		Xcc-8004.1762.1	0.64	+0.8
1,692,639	-		Xcc-8004.1762.1	0.64	-0.3
1,692,639	-		Xcc-8004.1762.1	0.64	-0.9
1,692,993	+				-0.9
1,692,993	+				-2.3
1,693,011	+				-0.5
1,693,011	+				-2.7
1,693,157	+		Xcc-8004.1763.1	0.22	-0.2
1,693,158	-		Xcc-8004.1763.1	0.22	-1.5
1,693,266	-		Xcc-8004.1763.1	0.36	-0.2
1,693,409	+		Xcc-8004.1763.1	0.55	-2.5
1,693,410	-		Xcc-8004.1763.1	0.55	+0.2
1,693,565	+		Xcc-8004.1763.1	0.76	-3.5
1,693,565	+		Xcc-8004.1763.1	0.76	-1.2
1,693,565	+		Xcc-8004.1763.1	0.76	-2.3
1,693,566	-		Xcc-8004.1763.1	0.76	-1.5
1,693,566	-		Xcc-8004.1763.1	0.76	-1.5
1,693,572	-		Xcc-8004.1763.1	0.77	-1.5
1,693,572	-		Xcc-8004.1763.1	0.77	-0.2
1,693,671	-				-1.4
1,693,742	+				-0.1
1,693,742	+				+0.9
1,693,743	-				+0.6
1,693,743	-				-0.2
1,693,743	-				+0.7
1,693,743	-				+1.3
1,693,743	-				-0.8
1,693,906	+		Xcc-8004.1764.1	0.20	-0.3
1,693,907	-		Xcc-8004.1764.1	0.20	+0.4
1,693,931	+		Xcc-8004.1764.1	0.27	-0.2
1,693,931	+		Xcc-8004.1764.1	0.27	-2.1
1,693,931	+		Xcc-8004.1764.1	0.27	-0.7
1,693,932	-		Xcc-8004.1764.1	0.27	-0.4
1,693,943	+		Xcc-8004.1764.1	0.30	+1.2
1,693,943	+		Xcc-8004.1764.1	0.30	-0.1
1,694,175	-				-0.1
1,694,175	-				-0.9
1,694,175	-				-1.3
1,694,175	-				+0.4
1,694,175	-				-2.0
1,694,195	+				-0.2
1,694,207	+				-0.7
1,694,208	-				-1.0
1,694,208	-				+2.8
1,694,323	-				+0.3
1,694,326	+				+0.5
1,694,327	-				+0.5
1,694,327	-				+0.8