Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1502.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
1,434,198	+				+1.2
1,434,198	+				-2.3
1,434,199	-				-0.2
1,434,199	-				-0.7
1,434,199	-				-1.0
1,434,217	+				+0.8
1,434,217	+				+0.8
1,434,218	-				-1.4
1,434,218	-				+0.3
1,434,359	+				+0.4
1,434,361	+				+0.8
1,434,361	+				-1.0
1,434,361	+				+0.5
1,434,361	+				-0.3
1,434,361	+				+0.7
1,434,361	+				-1.1
1,434,361	+				-0.6
1,434,361	+				-0.2
1,434,361	+				-0.8
1,434,361	+				+1.2
1,434,361	+				-0.9
1,434,361	+				-2.1
1,434,361	+				-0.4
1,434,361	+				+0.6
1,434,361	+				+0.2
1,434,361	+				-0.4
1,434,361	+				+0.8
1,434,361	+				+0.8
1,434,361	+				-0.0
1,434,362	-				+0.1
1,434,362	-				+0.9
1,434,362	-				-0.2
1,434,362	-				-0.4
1,434,362	-				+0.9
1,434,362	-				-1.3
1,434,362	-				-0.2
1,434,362	-				-2.0
1,434,362	-				-1.8
1,434,362	-				-2.6
1,434,362	-				-0.7
1,434,362	-				+0.7
1,434,362	-				+0.6
1,434,362	-				+0.2
1,434,362	-				-0.2
1,434,362	-				-2.5
1,434,362	-				-0.0
1,434,362	-				+0.2
1,434,362	-				-0.1
1,434,367	+				+1.2
1,434,367	+				-0.9
1,434,367	+				-0.1
1,434,368	-				-0.4
1,434,368	-				+0.6
1,434,368	-				+1.1
1,434,368	-				+0.7
1,434,368	-				-0.2
1,434,368	-				+0.2
1,434,368	-				+0.6
1,434,368	-				-0.0
1,434,368	-				-0.6
1,434,415	+				+1.3
1,434,415	+				-0.4
1,434,758	+		Xcc-8004.1502.1	0.84	-2.0
1,434,759	-		Xcc-8004.1502.1	0.84	-0.8
1,434,759	-		Xcc-8004.1502.1	0.84	+0.2
1,434,759	-		Xcc-8004.1502.1	0.84	-0.4
1,434,789	+				-0.2
1,434,789	+				+0.5
1,434,790	-				-1.1
1,434,805	+				+0.3
1,434,805	+				+0.1
1,434,805	+				-0.9
1,434,805	+				+0.2
1,434,805	+				-2.5
1,434,806	-				+0.0
1,434,806	-				-0.7
1,434,806	-				+0.8
1,434,809	+				-1.7
1,434,809	+				+2.2
1,434,809	+				+0.2
1,434,809	+				-1.1
1,434,809	+				-0.2
1,434,810	-				+0.9
1,434,810	-				+0.2
1,434,854	+				-1.2
1,434,854	+				-0.9
1,434,854	+				-2.1
1,434,854	+				+0.5
1,434,855	-				-0.2
1,434,855	-				-0.4
1,434,918	+		Xcc-8004.1503.1	0.21	-1.3
1,434,918	+		Xcc-8004.1503.1	0.21	-0.7
1,435,141	+		Xcc-8004.1503.1	0.83	+0.2
1,435,141	+		Xcc-8004.1503.1	0.83	+1.2
1,435,141	+		Xcc-8004.1503.1	0.83	-0.3
1,435,141	+		Xcc-8004.1503.1	0.83	-0.8
1,435,141	+		Xcc-8004.1503.1	0.83	-0.4
1,435,141	+		Xcc-8004.1503.1	0.83	-2.1
1,435,142	-		Xcc-8004.1503.1	0.83	-0.0
1,435,142	-		Xcc-8004.1503.1	0.83	-1.3
1,435,142	-		Xcc-8004.1503.1	0.83	+1.2
1,435,142	-		Xcc-8004.1503.1	0.83	+0.3
1,435,293	-		Xcc-8004.1504.1	0.17	+0.5
1,435,626	+		Xcc-8004.1504.1	0.80	-0.3
1,435,732	-				+1.5
1,435,754	+				-0.7
1,435,754	+				-1.0
1,435,754	+				-0.4
1,435,754	+				+0.7
1,435,754	+				+0.3
1,435,755	-				-0.1
1,435,755	-				+0.2
1,435,755	-				+0.6
1,435,778	+				+0.5
1,435,778	+				-0.8
1,435,806	-				+2.0