Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1236.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
1,164,431	-				+0.2
1,164,514	+				-0.2
1,164,650	-				-0.6
1,164,650	-				+0.3
1,164,899	+				+0.6
1,164,899	+				-0.6
1,164,900	-				-0.0
1,164,900	-				+0.2
1,164,900	-				+0.2
1,164,948	+				-2.3
1,164,948	+				-0.6
1,164,949	-				-1.3
1,164,949	-				-2.3
1,164,949	-				-2.2
1,165,079	+		Xcc-8004.1236.1	0.12	-1.4
1,165,088	+		Xcc-8004.1236.1	0.13	-0.8
1,165,088	+		Xcc-8004.1236.1	0.13	-2.3
1,165,088	+		Xcc-8004.1236.1	0.13	-1.9
1,165,089	-		Xcc-8004.1236.1	0.13	-2.3
1,165,089	-		Xcc-8004.1236.1	0.13	-2.7
1,165,100	+		Xcc-8004.1236.1	0.14	-0.8
1,165,100	+		Xcc-8004.1236.1	0.14	-1.6
1,165,100	+		Xcc-8004.1236.1	0.14	-3.0
1,165,100	+		Xcc-8004.1236.1	0.14	-0.8
1,165,100	+		Xcc-8004.1236.1	0.14	-1.8
1,165,100	+		Xcc-8004.1236.1	0.14	-0.6
1,165,356	-		Xcc-8004.1236.1	0.40	-2.5
1,165,377	-		Xcc-8004.1236.1	0.42	-2.3
1,165,377	-		Xcc-8004.1236.1	0.42	-1.4
1,165,377	-		Xcc-8004.1236.1	0.42	-1.6
1,165,377	-		Xcc-8004.1236.1	0.42	-1.3
1,165,377	-		Xcc-8004.1236.1	0.42	-0.3
1,165,377	-		Xcc-8004.1236.1	0.42	-0.9
1,165,719	-		Xcc-8004.1236.1	0.76	-2.3
1,165,782	-		Xcc-8004.1236.1	0.82	+0.0
1,165,783	+		Xcc-8004.1236.1	0.83	-1.8
1,165,784	-		Xcc-8004.1236.1	0.83	-2.9
1,165,784	-		Xcc-8004.1236.1	0.83	+0.2
1,165,896	-				+0.7
1,165,913	+				-2.4
1,165,955	+				+0.2
1,165,955	+				+0.0
1,165,955	+				+0.7
1,165,955	+				-1.1
1,165,955	+				-0.7
1,165,955	+				+0.3
1,165,955	+				-1.3
1,165,956	-				-0.8
1,165,956	-				+0.6
1,166,052	+				+0.7
1,166,052	+				+0.6
1,166,052	+				-0.2
1,166,052	+				-1.3
1,166,052	+				+1.0
1,166,052	+				-1.4
1,166,052	+				-0.0
1,166,052	+				+1.8
1,166,052	+				-2.3
1,166,052	+				+0.3
1,166,052	+				-0.8
1,166,052	+				+0.5
1,166,052	+				+0.1
1,166,052	+				-1.8
1,166,052	+				+0.6
1,166,052	+				+0.0
1,166,052	+				-0.2
1,166,053	-				-1.3
1,166,053	-				-1.5
1,166,053	-				-0.3
1,166,053	-				+0.0
1,166,053	-				-0.4
1,166,053	-				-1.0
1,166,053	-				+0.0
1,166,053	-				+0.9
1,166,053	-				-0.2
1,166,053	-				+0.2
1,166,053	-				-0.5
1,166,053	-				-2.1
1,166,053	-				-0.8
1,166,094	+				+1.6
1,166,155	-				-0.7
1,166,155	-				+0.3
1,166,162	+				+0.5
1,166,162	+				+0.7
1,166,162	+				-1.0
1,166,162	+				+0.7
1,166,162	+				+0.4
1,166,162	+				-0.3
1,166,162	+				+0.1
1,166,162	+				-0.5
1,166,163	-				-1.0
1,166,163	-				-0.9
1,166,163	-				-0.5
1,166,163	-				-0.3
1,166,163	-				-1.2
1,166,163	-				+0.0
1,166,174	+				-0.3
1,166,174	+				-1.8
1,166,174	+				-0.7
1,166,174	+				-0.1
1,166,174	+				+0.4
1,166,175	-				+1.5
1,166,175	-				+0.2
1,166,175	-				+1.2
1,166,175	-				-0.6
1,166,175	-				+0.3
1,166,211	-				-0.8
1,166,211	-				-1.7
1,166,211	-				+0.7
1,166,211	-				-0.7
1,166,322	+		Xcc-8004.1238.1	0.32	+1.2
1,166,322	+		Xcc-8004.1238.1	0.32	+0.4
1,166,352	+		Xcc-8004.1238.1	0.39	+0.6
1,166,352	+		Xcc-8004.1238.1	0.39	-0.8
1,166,353	-		Xcc-8004.1238.1	0.39	+0.0
1,166,373	-		Xcc-8004.1238.1	0.43	+0.5
1,166,469	+		Xcc-8004.1238.1	0.64	-2.8
1,166,469	+		Xcc-8004.1238.1	0.64	+1.6
1,166,469	+		Xcc-8004.1238.1	0.64	+0.2
1,166,470	-		Xcc-8004.1238.1	0.64	-0.6
1,166,470	-		Xcc-8004.1238.1	0.64	-0.1
1,166,470	-		Xcc-8004.1238.1	0.64	+0.1
1,166,470	-		Xcc-8004.1238.1	0.64	-0.0
1,166,470	-		Xcc-8004.1238.1	0.64	+0.7
1,166,470	-		Xcc-8004.1238.1	0.64	+0.3
1,166,470	-		Xcc-8004.1238.1	0.64	+0.8
1,166,535	+		Xcc-8004.1238.1	0.78	-0.7
1,166,535	+		Xcc-8004.1238.1	0.78	-1.1
1,166,535	+		Xcc-8004.1238.1	0.78	+0.7
1,166,536	-		Xcc-8004.1238.1	0.78	+0.1
1,166,536	-		Xcc-8004.1238.1	0.78	+0.5
1,166,536	-		Xcc-8004.1238.1	0.78	-0.4
1,166,536	-		Xcc-8004.1238.1	0.78	-0.8
1,166,536	-		Xcc-8004.1238.1	0.78	-0.1
1,166,536	-		Xcc-8004.1238.1	0.78	+0.5
1,166,609	+				+0.7
1,166,609	+				+0.2
1,166,610	-				+0.7
1,166,610	-				-0.5
1,166,610	-				+0.7
1,166,637	+				+0.2
1,166,637	+				+0.6
1,166,676	-				+1.7
1,166,695	+				+0.3
1,166,695	+				-0.3
1,166,713	-				+0.3
1,166,713	-				+0.2
1,166,729	+				+1.1
1,166,729	+				+0.2
1,166,730	-				-0.3
1,166,730	-				-1.4
1,166,730	-				+0.8
1,166,730	-				-1.1
1,166,769	+				-1.3
1,166,769	+				+1.0
1,166,769	+				-0.2
1,166,769	+				-0.3
1,166,769	+				-0.8
1,166,770	-				-1.5
1,166,770	-				+1.1
1,166,770	-				-0.6
1,166,770	-				+0.4
1,166,770	-				+0.0
1,166,826	+				-1.0
1,166,826	+				-0.3
1,166,826	+				+0.6
1,166,871	+				-0.1