Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1205.1

Experiment: Pectin from apple 2 g/L (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple 2 g/L (C)
1,137,991	+		Xcc-8004.1204.1	0.62	+0.4
1,137,991	+		Xcc-8004.1204.1	0.62	-0.8
1,138,650	-				-1.7
1,138,650	-				+1.7
1,138,919	+		Xcc-8004.1205.1	0.25	-1.7
1,138,920	-		Xcc-8004.1205.1	0.26	-2.9
1,138,971	-		Xcc-8004.1205.1	0.39	-1.6
1,138,971	-		Xcc-8004.1205.1	0.39	+0.2
1,138,985	-		Xcc-8004.1205.1	0.43	-1.1
1,139,121	-		Xcc-8004.1205.1	0.78	-1.8
1,139,153	+		Xcc-8004.1205.1	0.87	-1.7
1,139,185	-				-2.1
1,139,295	-				-0.7
1,139,381	+				-0.2
1,139,381	+				+0.3
1,139,381	+				+1.4
1,139,381	+				-0.4
1,139,382	-				-0.1
1,139,423	-				-0.3
1,139,433	-				-0.5
1,139,502	+		Xcc-8004.1206.1	0.10	-0.1
1,139,676	-		Xcc-8004.1206.1	0.22	-0.3
1,139,775	+		Xcc-8004.1206.1	0.28	+1.2
1,140,185	+		Xcc-8004.1206.1	0.55	+0.1