Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11860

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11855 and BWI76_RS11860 overlap by 1 nucleotidesBWI76_RS11860 and BWI76_RS11865 are separated by 358 nucleotides BWI76_RS11855: BWI76_RS11855 - bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase, at 2,492,334 to 2,493,929 _RS11855 BWI76_RS11860: BWI76_RS11860 - anthranilate synthase component I, at 2,493,929 to 2,495,491 _RS11860 BWI76_RS11865: BWI76_RS11865 - phosphatase, at 2,495,850 to 2,496,719 _RS11865 Position (kb) 2493 2494 2495 2496Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2493.033 kb on + strand, within BWI76_RS11855at 2493.262 kb on + strand, within BWI76_RS11855at 2493.342 kb on - strand, within BWI76_RS11855at 2493.352 kb on - strand, within BWI76_RS11855at 2493.681 kb on + strand, within BWI76_RS11855at 2493.766 kb on - strand, within BWI76_RS11855at 2493.810 kb on - strandat 2493.856 kb on - strandat 2494.054 kb on - strandat 2494.333 kb on + strand, within BWI76_RS11860at 2494.357 kb on + strandat 2494.359 kb on + strand, within BWI76_RS11860at 2494.447 kb on - strand, within BWI76_RS11860at 2494.583 kb on - strand, within BWI76_RS11860at 2494.752 kb on + strand, within BWI76_RS11860at 2494.845 kb on - strand, within BWI76_RS11860at 2495.032 kb on + strand, within BWI76_RS11860at 2495.141 kb on - strand, within BWI76_RS11860at 2495.173 kb on + strand, within BWI76_RS11860at 2495.199 kb on + strand, within BWI76_RS11860at 2495.240 kb on - strand, within BWI76_RS11860at 2495.373 kb on + strandat 2495.453 kb on + strandat 2495.476 kb on + strandat 2495.484 kb on - strandat 2495.946 kb on + strand, within BWI76_RS11865at 2496.480 kb on - strand, within BWI76_RS11865

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
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2,493,033 + BWI76_RS11855 0.44 -5.8
2,493,262 + BWI76_RS11855 0.58 -6.1
2,493,342 - BWI76_RS11855 0.63 -4.1
2,493,352 - BWI76_RS11855 0.64 -4.3
2,493,681 + BWI76_RS11855 0.84 -2.9
2,493,766 - BWI76_RS11855 0.90 -3.2
2,493,810 - -5.0
2,493,856 - -4.1
2,494,054 - -3.9
2,494,333 + BWI76_RS11860 0.26 -4.2
2,494,357 + -0.8
2,494,359 + BWI76_RS11860 0.28 -2.9
2,494,447 - BWI76_RS11860 0.33 -4.5
2,494,583 - BWI76_RS11860 0.42 -4.2
2,494,752 + BWI76_RS11860 0.53 -6.2
2,494,845 - BWI76_RS11860 0.59 -1.2
2,495,032 + BWI76_RS11860 0.71 -4.1
2,495,141 - BWI76_RS11860 0.78 -5.5
2,495,173 + BWI76_RS11860 0.80 -4.6
2,495,199 + BWI76_RS11860 0.81 -2.2
2,495,240 - BWI76_RS11860 0.84 -2.8
2,495,373 + -4.6
2,495,453 + -3.3
2,495,476 + -5.2
2,495,484 - -4.1
2,495,946 + BWI76_RS11865 0.11 -0.0
2,496,480 - BWI76_RS11865 0.72 -0.7

Or see this region's nucleotide sequence