Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS00905

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS00895 and BWI76_RS00900 overlap by 20 nucleotidesBWI76_RS00900 and BWI76_RS00905 are separated by 126 nucleotidesBWI76_RS00905 and BWI76_RS00910 are separated by 61 nucleotidesBWI76_RS00910 and BWI76_RS00915 are separated by 108 nucleotidesBWI76_RS00915 and BWI76_RS00920 are separated by 169 nucleotides BWI76_RS00895: BWI76_RS00895 - glutamate racemase, at 185,262 to 186,116 _RS00895 BWI76_RS00900: BWI76_RS00900 - hypothetical protein, at 186,097 to 186,364 _RS00900 BWI76_RS00905: BWI76_RS00905 - 16S ribosomal RNA, at 186,491 to 188,044 _RS00905 BWI76_RS00910: BWI76_RS00910 - tRNA-Ile, at 188,106 to 188,182 _RS00910 BWI76_RS00915: BWI76_RS00915 - tRNA-Ala, at 188,291 to 188,366 _RS00915 BWI76_RS00920: BWI76_RS00920 - 23S ribosomal RNA, at 188,536 to 191,462 _RS00920 Position (kb) 186 187 188 189Strain fitness (log2 ratio) -1 0 1at 186.174 kb on + strand, within BWI76_RS00900

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
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186,174 + BWI76_RS00900 0.29 +0.4

Or see this region's nucleotide sequence