Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1343

Experiment: Formate/Acetate-Sulfate (10/60-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (10/60-30 mM)
1,418,957	-	znuC	DVU1341	0.85	+0.4
1,419,089	-				-0.2
1,419,227	+	znuB	DVU1342	0.18	+0.2
1,419,238	+	znuB	DVU1342	0.19	+0.3
1,419,265	+	znuB	DVU1342	0.23	+0.4
1,419,265	+	znuB	DVU1342	0.23	+0.4
1,419,325	+	znuB	DVU1342	0.30	-0.1
1,419,403	-	znuB	DVU1342	0.40	+0.4
1,419,410	+	znuB	DVU1342	0.41	+0.6
1,419,457	-	znuB	DVU1342	0.46	+0.4
1,419,457	-	znuB	DVU1342	0.46	+0.6
1,419,493	+	znuB	DVU1342	0.51	+0.5
1,419,496	-	znuB	DVU1342	0.51	+0.2
1,419,498	+	znuB	DVU1342	0.51	+0.3
1,419,498	+	znuB	DVU1342	0.51	+0.5
1,419,498	+	znuB	DVU1342	0.51	+1.1
1,419,572	+	znuB	DVU1342	0.61	+0.3
1,419,593	-	znuB	DVU1342	0.63	+0.6
1,419,595	-	znuB	DVU1342	0.63	+0.4
1,419,626	+	znuB	DVU1342	0.67	+1.1
1,419,626	+	znuB	DVU1342	0.67	+0.1
1,419,723	+	znuB	DVU1342	0.79	+0.2
1,419,733	+	znuB	DVU1342	0.81	+0.7
1,419,823	+				+1.1
1,419,839	-				-0.0
1,419,860	+				-1.5
1,419,861	+				+0.4
1,419,877	-				-0.3
1,420,003	+	znuA	DVU1343	0.11	+0.0
1,420,003	+	znuA	DVU1343	0.11	+0.4
1,420,011	-	znuA	DVU1343	0.12	+0.1
1,420,011	-	znuA	DVU1343	0.12	+0.8
1,420,011	-	znuA	DVU1343	0.12	+0.6
1,420,035	+	znuA	DVU1343	0.14	+0.8
1,420,046	+	znuA	DVU1343	0.15	+0.2
1,420,111	-	znuA	DVU1343	0.22	+0.2
1,420,142	+	znuA	DVU1343	0.25	+0.8
1,420,159	+	znuA	DVU1343	0.26	+0.2
1,420,200	+	znuA	DVU1343	0.31	+0.7
1,420,204	+	znuA	DVU1343	0.31	+0.1
1,420,221	+	znuA	DVU1343	0.33	+0.5
1,420,239	-	znuA	DVU1343	0.34	+0.5
1,420,291	+	znuA	DVU1343	0.40	+0.4
1,420,315	-	znuA	DVU1343	0.42	+0.6
1,420,382	+	znuA	DVU1343	0.49	+0.3
1,420,440	-	znuA	DVU1343	0.54	+0.5
1,420,482	-	znuA	DVU1343	0.59	+0.3
1,420,542	-	znuA	DVU1343	0.64	+0.8
1,420,610	+	znuA	DVU1343	0.71	+0.5
1,420,649	+	znuA	DVU1343	0.75	+0.3
1,420,892	-				+0.8
1,420,925	+				+0.1
1,420,980	+				+0.1
1,420,988	-				-0.1
1,421,048	-				-0.2
1,421,091	-				+0.3
1,421,226	+				-0.3