Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3548

Experiment: Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N)
4,138,627	-		Pf6N2E2_3547	0.33	-0.2
4,138,627	-		Pf6N2E2_3547	0.33	+1.4
4,138,671	+		Pf6N2E2_3547	0.37	+0.9
4,138,671	+		Pf6N2E2_3547	0.37	+0.8
4,138,671	+		Pf6N2E2_3547	0.37	+0.7
4,138,707	+		Pf6N2E2_3547	0.40	+0.4
4,138,728	+		Pf6N2E2_3547	0.41	+1.3
4,138,728	+		Pf6N2E2_3547	0.41	-0.2
4,138,729	-		Pf6N2E2_3547	0.42	+1.4
4,138,729	-		Pf6N2E2_3547	0.42	+1.7
4,138,729	-		Pf6N2E2_3547	0.42	+0.9
4,138,735	-		Pf6N2E2_3547	0.42	+2.2
4,138,812	+		Pf6N2E2_3547	0.48	+1.4
4,138,813	-		Pf6N2E2_3547	0.48	+1.4
4,138,836	+		Pf6N2E2_3547	0.50	+1.2
4,138,837	-		Pf6N2E2_3547	0.50	+0.0
4,138,849	+		Pf6N2E2_3547	0.51	+1.2
4,138,929	+		Pf6N2E2_3547	0.57	-0.2
4,138,929	+		Pf6N2E2_3547	0.57	+3.5
4,138,930	-		Pf6N2E2_3547	0.57	+0.8
4,138,930	-		Pf6N2E2_3547	0.57	+2.1
4,138,930	-		Pf6N2E2_3547	0.57	+1.0
4,138,931	+		Pf6N2E2_3547	0.58	+1.6
4,139,056	-		Pf6N2E2_3547	0.67	+2.0
4,139,056	-		Pf6N2E2_3547	0.67	+0.4
4,139,112	+		Pf6N2E2_3547	0.72	-0.0
4,139,112	+		Pf6N2E2_3547	0.72	-0.3
4,139,178	+		Pf6N2E2_3547	0.77	+0.0
4,139,178	+		Pf6N2E2_3547	0.77	+0.4
4,139,178	+		Pf6N2E2_3547	0.77	-0.3
4,139,179	-		Pf6N2E2_3547	0.77	+1.4
4,139,179	-		Pf6N2E2_3547	0.77	+1.4
4,139,179	-		Pf6N2E2_3547	0.77	+2.5
4,139,179	-		Pf6N2E2_3547	0.77	-1.6
4,139,179	-		Pf6N2E2_3547	0.77	+1.2
4,139,179	-		Pf6N2E2_3547	0.77	+1.5
4,139,621	+				+0.7
4,139,621	+				+1.1
4,139,622	-				+0.2
4,139,622	-				+1.1
4,139,622	-				+1.8
4,139,622	-				+0.7
4,139,626	+				-0.4
4,139,626	+				+1.4
4,139,626	+				+1.5
4,139,626	+				+1.1
4,139,627	-				+0.9
4,139,627	-				+1.4
4,139,627	-				+1.7
4,139,627	-				+1.5
4,140,128	-		Pf6N2E2_3548	0.33	+0.4
4,140,368	+		Pf6N2E2_3548	0.49	+0.3
4,140,377	+		Pf6N2E2_3548	0.50	+0.6
4,140,377	+		Pf6N2E2_3548	0.50	+0.5
4,140,377	+		Pf6N2E2_3548	0.50	-0.0
4,140,377	+		Pf6N2E2_3548	0.50	+0.5
4,140,377	+		Pf6N2E2_3548	0.50	-0.9
4,140,377	+		Pf6N2E2_3548	0.50	+0.6
4,140,377	+		Pf6N2E2_3548	0.50	+0.6
4,140,377	+		Pf6N2E2_3548	0.50	+0.2
4,140,377	+		Pf6N2E2_3548	0.50	-0.3
4,140,378	-		Pf6N2E2_3548	0.50	+1.9
4,140,378	-		Pf6N2E2_3548	0.50	+1.0
4,140,378	-		Pf6N2E2_3548	0.50	+1.4
4,140,378	-		Pf6N2E2_3548	0.50	+0.2
4,140,378	-		Pf6N2E2_3548	0.50	+1.9
4,140,378	-		Pf6N2E2_3548	0.50	+1.0
4,140,378	-		Pf6N2E2_3548	0.50	+1.3
4,140,429	-		Pf6N2E2_3548	0.53	+2.5
4,140,512	+		Pf6N2E2_3548	0.59	-0.3
4,140,512	+		Pf6N2E2_3548	0.59	-0.6
4,140,513	-		Pf6N2E2_3548	0.59	+1.1
4,140,646	-		Pf6N2E2_3548	0.68	+1.6
4,140,668	+		Pf6N2E2_3548	0.69	-1.4
4,140,668	+		Pf6N2E2_3548	0.69	-0.5
4,140,669	-		Pf6N2E2_3548	0.69	+0.9
4,140,914	+		Pf6N2E2_3548	0.86	+0.3
4,140,914	+		Pf6N2E2_3548	0.86	-1.2
4,140,914	+		Pf6N2E2_3548	0.86	-0.5
4,140,914	+		Pf6N2E2_3548	0.86	+0.6
4,140,914	+		Pf6N2E2_3548	0.86	-1.1
4,140,914	+		Pf6N2E2_3548	0.86	-1.0
4,140,914	+		Pf6N2E2_3548	0.86	-0.0
4,140,915	-		Pf6N2E2_3548	0.86	+1.5
4,140,915	-		Pf6N2E2_3548	0.86	+0.9
4,140,915	-		Pf6N2E2_3548	0.86	+0.6
4,140,915	-		Pf6N2E2_3548	0.86	+1.0
4,140,915	-		Pf6N2E2_3548	0.86	+0.5
4,141,273	+		Pf6N2E2_3549	0.13	-0.4
4,141,273	+		Pf6N2E2_3549	0.13	+0.4
4,141,274	-		Pf6N2E2_3549	0.13	+0.2
4,141,274	-		Pf6N2E2_3549	0.13	+1.4
4,141,274	-		Pf6N2E2_3549	0.13	+0.8
4,141,275	+		Pf6N2E2_3549	0.14	+0.3
4,141,275	+		Pf6N2E2_3549	0.14	+0.1
4,141,276	-		Pf6N2E2_3549	0.14	+1.2
4,141,276	-		Pf6N2E2_3549	0.14	+1.4
4,141,276	-		Pf6N2E2_3549	0.14	+0.2
4,141,276	-		Pf6N2E2_3549	0.14	+1.0
4,141,276	-		Pf6N2E2_3549	0.14	+1.9
4,141,276	-		Pf6N2E2_3549	0.14	+0.7
4,141,276	-		Pf6N2E2_3549	0.14	+0.8
4,141,276	-		Pf6N2E2_3549	0.14	+1.8
4,141,276	-		Pf6N2E2_3549	0.14	+1.1
4,141,276	-		Pf6N2E2_3549	0.14	+0.7
4,141,276	-		Pf6N2E2_3549	0.14	+1.4
4,141,396	+		Pf6N2E2_3549	0.25	-0.6
4,141,411	+		Pf6N2E2_3549	0.26	+0.1
4,141,411	+		Pf6N2E2_3549	0.26	+1.5
4,141,411	+		Pf6N2E2_3549	0.26	+0.2
4,141,411	+		Pf6N2E2_3549	0.26	-0.6
4,141,412	-		Pf6N2E2_3549	0.26	+0.1
4,141,412	-		Pf6N2E2_3549	0.26	+0.9
4,141,412	-		Pf6N2E2_3549	0.26	+0.4
4,141,412	-		Pf6N2E2_3549	0.26	+1.2
4,141,412	-		Pf6N2E2_3549	0.26	+1.0
4,141,412	-		Pf6N2E2_3549	0.26	+1.3
4,141,412	-		Pf6N2E2_3549	0.26	+1.6
4,141,412	-		Pf6N2E2_3549	0.26	+0.8
4,141,412	-		Pf6N2E2_3549	0.26	+0.7
4,141,412	-		Pf6N2E2_3549	0.26	-0.3
4,141,412	-		Pf6N2E2_3549	0.26	+0.2
4,141,412	-		Pf6N2E2_3549	0.26	+0.1
4,141,412	-		Pf6N2E2_3549	0.26	+1.7
4,141,486	+		Pf6N2E2_3549	0.33	+1.6
4,141,600	+		Pf6N2E2_3549	0.44	+1.4
4,141,600	+		Pf6N2E2_3549	0.44	-0.4
4,141,601	-		Pf6N2E2_3549	0.44	+1.4
4,141,601	-		Pf6N2E2_3549	0.44	-0.4
4,141,601	-		Pf6N2E2_3549	0.44	+0.4
4,141,945	+		Pf6N2E2_3549	0.76	+0.0
4,141,945	+		Pf6N2E2_3549	0.76	-0.9
4,141,945	+		Pf6N2E2_3549	0.76	+2.4
4,141,945	+		Pf6N2E2_3549	0.76	-0.6
4,141,945	+		Pf6N2E2_3549	0.76	-1.0
4,141,945	+		Pf6N2E2_3549	0.76	-1.4
4,141,945	+		Pf6N2E2_3549	0.76	-0.1
4,141,946	-		Pf6N2E2_3549	0.76	+0.5
4,141,946	-		Pf6N2E2_3549	0.76	+1.8
4,141,946	-		Pf6N2E2_3549	0.76	+1.3
4,141,946	-		Pf6N2E2_3549	0.76	+1.1
4,142,114	-				+1.6
4,142,114	-				+0.8
4,142,114	-				+1.9