Experiment: Suberic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06133 and H281DRAFT_06134 are separated by 462 nucleotides H281DRAFT_06134 and H281DRAFT_06135 overlap by 180 nucleotides
H281DRAFT_06133: H281DRAFT_06133 - hypothetical protein, at 21,916 to 23,049
_06133
H281DRAFT_06134: H281DRAFT_06134 - hypothetical protein, at 23,512 to 24,057
_06134
H281DRAFT_06135: H281DRAFT_06135 - hypothetical protein, at 23,878 to 24,783
_06135
Position (kb)
23
24
25 Strain fitness (log2 ratio)
-1
0
1
2
3 at 22.937 kb on - strand at 22.937 kb on - strand at 22.966 kb on + strand at 23.047 kb on + strand at 23.083 kb on + strand at 23.113 kb on + strand at 23.113 kb on + strand at 23.114 kb on - strand at 23.315 kb on + strand at 23.316 kb on - strand at 23.497 kb on + strand at 23.497 kb on + strand at 23.619 kb on + strand, within H281DRAFT_06134 at 23.699 kb on - strand at 23.699 kb on - strand, within H281DRAFT_06134 at 23.879 kb on + strand at 24.492 kb on - strand, within H281DRAFT_06135 at 24.751 kb on - strand at 24.846 kb on + strand at 24.846 kb on + strand at 24.846 kb on + strand at 24.846 kb on + strand at 24.847 kb on - strand at 24.849 kb on - strand at 24.913 kb on - strand at 24.935 kb on - strand at 24.998 kb on + strand at 24.998 kb on + strand at 24.999 kb on - strand at 25.078 kb on + strand at 25.079 kb on - strand at 25.107 kb on - strand at 25.125 kb on - strand at 25.125 kb on - strand at 25.125 kb on - strand at 25.125 kb on - strand at 25.150 kb on + strand at 25.210 kb on + strand at 25.210 kb on + strand at 25.213 kb on + strand at 25.213 kb on + strand at 25.214 kb on - strand at 25.214 kb on - strand at 25.222 kb on - strand at 25.319 kb on + strand at 25.320 kb on - strand at 25.331 kb on - strand at 25.463 kb on + strand at 25.463 kb on + strand at 25.534 kb on + strand at 25.534 kb on + strand at 25.571 kb on - strand at 25.625 kb on - strand at 25.742 kb on + strand at 25.743 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Suberic (C) remove 22,937 - -0.1 22,937 - -0.5 22,966 + -0.5 23,047 + +1.0 23,083 + +0.0 23,113 + +0.0 23,113 + +0.0 23,114 - +0.3 23,315 + -0.5 23,316 - -0.7 23,497 + -0.1 23,497 + +0.3 23,619 + H281DRAFT_06134 0.20 -0.1 23,699 - +3.1 23,699 - H281DRAFT_06134 0.34 +1.4 23,879 + +0.2 24,492 - H281DRAFT_06135 0.68 +0.7 24,751 - +0.2 24,846 + -0.5 24,846 + -0.9 24,846 + -0.2 24,846 + +0.0 24,847 - +2.8 24,849 - +0.3 24,913 - +0.4 24,935 - +0.6 24,998 + +1.4 24,998 + +0.1 24,999 - +0.1 25,078 + +0.3 25,079 - +0.1 25,107 - +0.1 25,125 - -0.0 25,125 - -0.1 25,125 - +0.3 25,125 - -1.0 25,150 + -0.3 25,210 + -1.2 25,210 + +0.4 25,213 + +0.4 25,213 + -0.5 25,214 - +1.1 25,214 - -0.2 25,222 - -0.8 25,319 + +0.3 25,320 - +0.1 25,331 - +0.4 25,463 + +0.5 25,463 + -0.1 25,534 + +0.1 25,534 + -0.2 25,571 - +0.4 25,625 - +0.6 25,742 + +0.6 25,743 - +0.0
Or see this region's nucleotide sequence