Experiment: Suberic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02362 and H281DRAFT_02363 are separated by 537 nucleotides H281DRAFT_02363 and H281DRAFT_02364 are separated by 126 nucleotides
H281DRAFT_02362: H281DRAFT_02362 - carboxylate-amine ligase, at 523,381 to 524,496
_02362
H281DRAFT_02363: H281DRAFT_02363 - transcriptional regulator, MarR family, at 525,034 to 525,672
_02363
H281DRAFT_02364: H281DRAFT_02364 - GMP synthase (glutamine-hydrolysing), at 525,799 to 526,512
_02364
Position (kb) 525
526 Strain fitness (log2 ratio) -1
0
1 at 524.050 kb on + strand, within H281DRAFT_02362 at 524.093 kb on + strand, within H281DRAFT_02362 at 524.107 kb on - strand, within H281DRAFT_02362 at 524.146 kb on + strand, within H281DRAFT_02362 at 524.146 kb on + strand, within H281DRAFT_02362 at 524.146 kb on + strand, within H281DRAFT_02362 at 524.147 kb on - strand, within H281DRAFT_02362 at 524.147 kb on - strand, within H281DRAFT_02362 at 524.209 kb on + strand, within H281DRAFT_02362 at 524.209 kb on + strand, within H281DRAFT_02362 at 524.210 kb on - strand, within H281DRAFT_02362 at 524.218 kb on + strand, within H281DRAFT_02362 at 524.528 kb on + strand at 524.528 kb on + strand at 524.529 kb on - strand at 524.588 kb on - strand at 524.605 kb on + strand at 524.605 kb on + strand at 524.609 kb on + strand at 524.609 kb on + strand at 524.609 kb on + strand at 524.609 kb on + strand at 524.610 kb on - strand at 524.611 kb on + strand at 524.611 kb on + strand at 524.612 kb on - strand at 524.612 kb on - strand at 524.612 kb on - strand at 524.615 kb on + strand at 524.615 kb on + strand at 524.616 kb on - strand at 524.616 kb on - strand at 524.619 kb on + strand at 524.619 kb on + strand at 524.620 kb on - strand at 524.620 kb on - strand at 524.622 kb on + strand at 524.622 kb on + strand at 524.623 kb on - strand at 524.626 kb on - strand at 524.698 kb on + strand at 524.703 kb on - strand at 524.746 kb on + strand at 524.747 kb on - strand at 524.747 kb on - strand at 524.774 kb on + strand at 524.775 kb on - strand at 524.795 kb on + strand at 524.796 kb on - strand at 524.844 kb on + strand at 524.844 kb on + strand at 524.844 kb on + strand at 524.844 kb on + strand at 524.845 kb on - strand at 524.845 kb on - strand at 524.845 kb on - strand at 524.845 kb on - strand at 524.845 kb on - strand at 524.870 kb on + strand at 524.870 kb on + strand at 524.871 kb on - strand at 524.871 kb on - strand at 524.883 kb on + strand at 524.884 kb on - strand at 524.988 kb on + strand at 524.989 kb on - strand at 524.989 kb on - strand at 525.033 kb on + strand at 525.050 kb on - strand at 525.636 kb on + strand at 525.671 kb on - strand at 525.832 kb on + strand at 525.832 kb on + strand at 525.832 kb on + strand at 525.833 kb on - strand at 526.053 kb on + strand, within H281DRAFT_02364 at 526.053 kb on + strand, within H281DRAFT_02364 at 526.230 kb on + strand, within H281DRAFT_02364 at 526.230 kb on + strand, within H281DRAFT_02364 at 526.230 kb on + strand, within H281DRAFT_02364 at 526.231 kb on - strand, within H281DRAFT_02364 at 526.668 kb on + strand at 526.669 kb on - strand at 526.669 kb on - strand at 526.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Suberic (C) remove 524,050 + H281DRAFT_02362 0.60 -1.1 524,093 + H281DRAFT_02362 0.64 -1.1 524,107 - H281DRAFT_02362 0.65 -0.5 524,146 + H281DRAFT_02362 0.69 -1.2 524,146 + H281DRAFT_02362 0.69 -1.0 524,146 + H281DRAFT_02362 0.69 -1.0 524,147 - H281DRAFT_02362 0.69 -1.1 524,147 - H281DRAFT_02362 0.69 -1.5 524,209 + H281DRAFT_02362 0.74 -0.7 524,209 + H281DRAFT_02362 0.74 -1.3 524,210 - H281DRAFT_02362 0.74 -1.0 524,218 + H281DRAFT_02362 0.75 -1.1 524,528 + +0.1 524,528 + +0.4 524,529 - +0.1 524,588 - +0.1 524,605 + -0.7 524,605 + -0.4 524,609 + -0.5 524,609 + -0.7 524,609 + +0.2 524,609 + +0.3 524,610 - -0.2 524,611 + +0.4 524,611 + -0.7 524,612 - -0.2 524,612 - -0.2 524,612 - +0.1 524,615 + -0.2 524,615 + -0.8 524,616 - -0.3 524,616 - +0.4 524,619 + -0.1 524,619 + -0.4 524,620 - +0.3 524,620 - +0.5 524,622 + -0.6 524,622 + +0.1 524,623 - +0.8 524,626 - -0.4 524,698 + +0.0 524,703 - +0.3 524,746 + -0.5 524,747 - +0.1 524,747 - -1.0 524,774 + -0.9 524,775 - +0.4 524,795 + +0.6 524,796 - +0.2 524,844 + +0.3 524,844 + -0.3 524,844 + -0.6 524,844 + -0.9 524,845 - +0.2 524,845 - -1.0 524,845 - -0.3 524,845 - -0.3 524,845 - -0.0 524,870 + +0.6 524,870 + -0.5 524,871 - +0.2 524,871 - -0.3 524,883 + -0.3 524,884 - -0.2 524,988 + +0.0 524,989 - +0.2 524,989 - -0.2 525,033 + -1.0 525,050 - -0.4 525,636 + +1.4 525,671 - +1.2 525,832 + +0.0 525,832 + -0.7 525,832 + +0.9 525,833 - +0.1 526,053 + H281DRAFT_02364 0.36 +0.6 526,053 + H281DRAFT_02364 0.36 -0.7 526,230 + H281DRAFT_02364 0.60 -0.4 526,230 + H281DRAFT_02364 0.60 -0.0 526,230 + H281DRAFT_02364 0.60 +0.8 526,231 - H281DRAFT_02364 0.61 -0.3 526,668 + +0.1 526,669 - +0.2 526,669 - -0.0 526,669 - +0.4
Or see this region's nucleotide sequence