Experiment: Suberic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01398 and H281DRAFT_01399 are separated by 95 nucleotides H281DRAFT_01399 and H281DRAFT_01400 are separated by 221 nucleotides H281DRAFT_01400 and H281DRAFT_01401 are separated by 94 nucleotides
H281DRAFT_01398: H281DRAFT_01398 - Formate/nitrite transporter FocA, FNT family, at 253,393 to 254,301
_01398
H281DRAFT_01399: H281DRAFT_01399 - arsenite efflux membrane protein ArsB, at 254,397 to 255,647
_01399
H281DRAFT_01400: H281DRAFT_01400 - cytochrome b561, at 255,869 to 256,429
_01400
H281DRAFT_01401: H281DRAFT_01401 - Polyisoprenoid-binding protein YceI, at 256,524 to 257,087
_01401
Position (kb) 254
255
256 Strain fitness (log2 ratio) -1
0
1 at 253.956 kb on - strand, within H281DRAFT_01398 at 254.095 kb on + strand, within H281DRAFT_01398 at 254.095 kb on + strand, within H281DRAFT_01398 at 254.096 kb on - strand, within H281DRAFT_01398 at 254.152 kb on + strand, within H281DRAFT_01398 at 255.077 kb on - strand, within H281DRAFT_01399 at 255.154 kb on + strand, within H281DRAFT_01399 at 255.621 kb on - strand at 255.673 kb on + strand at 255.674 kb on - strand at 255.674 kb on - strand at 255.674 kb on - strand at 255.779 kb on - strand at 255.779 kb on - strand at 255.830 kb on - strand at 255.879 kb on + strand at 255.966 kb on - strand, within H281DRAFT_01400 at 256.019 kb on + strand, within H281DRAFT_01400 at 256.053 kb on + strand, within H281DRAFT_01400 at 256.209 kb on - strand, within H281DRAFT_01400 at 256.209 kb on - strand, within H281DRAFT_01400 at 256.239 kb on - strand, within H281DRAFT_01400
Per-strain Table
Position Strand Gene LocusTag Fraction Suberic (C) remove 253,956 - H281DRAFT_01398 0.62 -0.3 254,095 + H281DRAFT_01398 0.77 +0.5 254,095 + H281DRAFT_01398 0.77 -0.3 254,096 - H281DRAFT_01398 0.77 -0.2 254,152 + H281DRAFT_01398 0.83 -0.3 255,077 - H281DRAFT_01399 0.54 -1.3 255,154 + H281DRAFT_01399 0.61 -0.6 255,621 - +0.1 255,673 + -0.3 255,674 - -0.1 255,674 - +0.5 255,674 - +0.1 255,779 - -0.3 255,779 - -0.7 255,830 - -0.2 255,879 + -0.1 255,966 - H281DRAFT_01400 0.17 -0.2 256,019 + H281DRAFT_01400 0.27 -0.1 256,053 + H281DRAFT_01400 0.33 -0.0 256,209 - H281DRAFT_01400 0.61 -1.3 256,209 - H281DRAFT_01400 0.61 -0.1 256,239 - H281DRAFT_01400 0.66 +0.3
Or see this region's nucleotide sequence