Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03139

Experiment: 48 hours of 100ug/mL streptomycin treatment after 3 hour phosphate starvation in M5G

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	48 hours of 100ug/mL streptomycin treatment after 3 hour phosphate starvation in M5G
3,287,503	+		CCNA_03138	0.68	-0.6
3,287,511	-		CCNA_03138	0.68	-0.1
3,287,511	-		CCNA_03138	0.68	+0.2
3,287,527	+		CCNA_03138	0.69	-0.6
3,287,528	+		CCNA_03138	0.69	+0.2
3,287,547	-		CCNA_03138	0.70	+1.1
3,287,548	-		CCNA_03138	0.70	-0.3
3,287,637	-		CCNA_03138	0.74	-1.9
3,287,666	+		CCNA_03138	0.75	-0.7
3,287,725	-		CCNA_03138	0.78	-1.6
3,287,747	+		CCNA_03138	0.79	+0.3
3,287,755	-		CCNA_03138	0.79	+0.9
3,287,797	+		CCNA_03138	0.81	-0.2
3,287,800	-		CCNA_03138	0.81	-0.9
3,287,813	+		CCNA_03138	0.82	-0.1
3,287,822	+		CCNA_03138	0.82	-0.0
3,287,826	-		CCNA_03138	0.82	-0.3
3,287,830	-		CCNA_03138	0.82	-0.1
3,287,837	+		CCNA_03138	0.83	+0.3
3,287,870	+		CCNA_03138	0.84	+0.4
3,287,870	+		CCNA_03138	0.84	-0.1
3,287,870	+		CCNA_03138	0.84	+0.0
3,287,870	+		CCNA_03138	0.84	-0.2
3,287,870	+		CCNA_03138	0.84	+0.3
3,287,913	+		CCNA_03138	0.86	+0.9
3,287,921	-		CCNA_03138	0.87	-1.4
3,287,927	+		CCNA_03138	0.87	+0.6
3,287,948	+		CCNA_03138	0.88	+0.5
3,287,948	+		CCNA_03138	0.88	+0.7
3,288,111	-				-0.6
3,288,119	+				-0.7
3,288,119	+				-0.6
3,288,119	+				+0.6
3,288,119	+				+0.3
3,288,119	+				+0.0
3,288,119	+				-1.6
3,288,119	+				-0.6
3,288,119	-				+0.4
3,288,126	-				+0.4
3,288,127	-				-0.3
3,288,127	-				+0.1
3,288,127	-				+0.7
3,288,127	-				-2.1
3,288,127	-				+1.2
3,288,127	-				-0.3
3,288,127	-				-0.1
3,288,140	+				+0.0
3,288,170	+				-0.4
3,288,178	-				+0.1
3,288,235	-				-1.4
3,288,235	-				-0.2
3,288,308	-				+1.3
3,288,379	-				+0.2
3,288,392	-				+0.7
3,288,445	+				+0.6
3,288,455	+				+0.4
3,288,463	-				+0.2
3,288,467	+				+1.5
3,288,523	+				-1.8
3,288,546	+				-4.2
3,288,546	+				-4.6
3,288,554	-				-3.5
3,288,558	+				-2.6
3,288,561	-				-4.9
3,288,571	+				-3.1
3,288,571	-				-4.8
3,288,590	+				-2.1
3,288,590	+				-1.5
3,288,590	+				-0.7
3,288,590	+				-4.9
3,288,598	-				-3.9
3,288,598	-				-5.2
3,288,645	+				-1.3
3,288,653	-				-5.1
3,288,653	-				-3.7
3,288,659	-		CCNA_03139	0.10	-4.7
3,288,681	+		CCNA_03139	0.11	-1.8
3,288,699	+		CCNA_03139	0.12	-3.1
3,288,703	-		CCNA_03139	0.13	-3.0
3,288,703	-		CCNA_03139	0.13	-4.7
3,288,707	-		CCNA_03139	0.13	-3.7
3,288,793	-		CCNA_03139	0.17	-4.0
3,288,832	+		CCNA_03139	0.20	-2.9
3,288,900	-		CCNA_03139	0.23	-3.1
3,288,900	-				+2.5
3,288,908	+		CCNA_03139	0.24	-3.9
3,288,916	-		CCNA_03139	0.24	-4.4
3,288,916	-		CCNA_03139	0.24	-4.9
3,288,916	-		CCNA_03139	0.24	-3.6
3,288,916	-		CCNA_03139	0.24	-2.7
3,288,916	-		CCNA_03139	0.24	-5.6
3,288,916	-		CCNA_03139	0.24	-4.3
3,288,916	-		CCNA_03139	0.24	-4.7
3,288,916	-		CCNA_03139	0.24	-2.7
3,288,916	-		CCNA_03139	0.24	-5.5
3,288,916	-		CCNA_03139	0.24	-1.5
3,288,916	-		CCNA_03139	0.24	-1.6
3,288,982	+		CCNA_03139	0.28	-0.9
3,289,024	+		CCNA_03139	0.30	-1.6
3,289,027	-				-1.0
3,289,031	+		CCNA_03139	0.30	-3.2
3,289,032	-		CCNA_03139	0.30	-3.4
3,289,032	-		CCNA_03139	0.30	-5.5
3,289,045	+		CCNA_03139	0.31	-4.3
3,289,053	-		CCNA_03139	0.31	-3.7
3,289,127	-		CCNA_03139	0.35	-4.1
3,289,127	-		CCNA_03139	0.35	-2.4
3,289,128	-		CCNA_03139	0.36	+2.5
3,289,184	+		CCNA_03139	0.39	-4.8
3,289,184	+		CCNA_03139	0.39	-4.0
3,289,184	+		CCNA_03139	0.39	-5.7
3,289,192	-		CCNA_03139	0.39	-5.2
3,289,195	+		CCNA_03139	0.39	-4.5
3,289,222	+		CCNA_03139	0.41	-3.6
3,289,262	-		CCNA_03139	0.43	-4.6
3,289,278	+		CCNA_03139	0.44	-2.6
3,289,283	+		CCNA_03139	0.44	-3.6
3,289,293	+		CCNA_03139	0.44	-2.2
3,289,321	+		CCNA_03139	0.46	-4.1
3,289,349	+		CCNA_03139	0.47	-5.2
3,289,349	+		CCNA_03139	0.47	-5.6
3,289,349	+		CCNA_03139	0.47	-3.9
3,289,357	-		CCNA_03139	0.48	-3.7
3,289,357	-		CCNA_03139	0.48	-4.3
3,289,357	-		CCNA_03139	0.48	-3.1
3,289,357	-		CCNA_03139	0.48	-3.7
3,289,357	-		CCNA_03139	0.48	-3.8
3,289,382	+		CCNA_03139	0.49	-4.4
3,289,382	+		CCNA_03139	0.49	-3.5
3,289,382	+		CCNA_03139	0.49	-2.5
3,289,382	+		CCNA_03139	0.49	-3.6
3,289,390	-		CCNA_03139	0.50	-3.7
3,289,391	-		CCNA_03139	0.50	-3.7
3,289,439	-		CCNA_03139	0.52	-3.2
3,289,471	+		CCNA_03139	0.54	-4.6
3,289,476	+		CCNA_03139	0.54	+2.5
3,289,481	+		CCNA_03139	0.55	-2.7
3,289,484	-		CCNA_03139	0.55	-4.0
3,289,484	-		CCNA_03139	0.55	-4.4
3,289,489	-		CCNA_03139	0.55	-2.9
3,289,563	-		CCNA_03139	0.59	-4.0
3,289,583	+		CCNA_03139	0.60	-0.9
3,289,591	-		CCNA_03139	0.61	-3.6
3,289,591	-		CCNA_03139	0.61	-3.0
3,289,591	-		CCNA_03139	0.61	-0.7
3,289,622	+		CCNA_03139	0.62	-2.7
3,289,630	-		CCNA_03139	0.63	-2.6
3,289,630	-		CCNA_03139	0.63	-6.1
3,289,630	-		CCNA_03139	0.63	-4.3
3,289,630	-		CCNA_03139	0.63	-4.2
3,289,654	+		CCNA_03139	0.64	-2.8
3,289,662	-		CCNA_03139	0.64	-2.3
3,289,662	-		CCNA_03139	0.64	-3.7
3,289,686	+		CCNA_03139	0.66	-4.0
3,289,686	+		CCNA_03139	0.66	-2.8
3,289,686	+		CCNA_03139	0.66	-2.8
3,289,686	+		CCNA_03139	0.66	-2.5
3,289,686	+		CCNA_03139	0.66	-1.1
3,289,694	-		CCNA_03139	0.66	-2.1
3,289,694	-		CCNA_03139	0.66	-4.7
3,289,695	-		CCNA_03139	0.66	-5.8
3,289,717	-		CCNA_03139	0.67	-2.7
3,289,750	+		CCNA_03139	0.69	-2.7
3,289,773	-		CCNA_03139	0.70	-5.2
3,289,775	+		CCNA_03139	0.70	-4.7
3,289,775	+		CCNA_03139	0.70	-1.9
3,289,775	+		CCNA_03139	0.70	-2.3
3,289,796	-		CCNA_03139	0.72	-2.9
3,289,886	-		CCNA_03139	0.76	-6.0
3,289,920	-		CCNA_03139	0.78	-6.4
3,289,920	-		CCNA_03139	0.78	-5.1
3,289,968	-		CCNA_03139	0.81	-5.3
3,290,005	+		CCNA_03139	0.83	-3.0
3,290,013	-		CCNA_03139	0.83	-5.7
3,290,028	+		CCNA_03139	0.84	-3.0
3,290,036	-		CCNA_03139	0.85	-3.8
3,290,036	-		CCNA_03139	0.85	-4.4
3,290,036	-		CCNA_03139	0.85	-2.1
3,290,036	-		CCNA_03139	0.85	-1.6
3,290,036	-		CCNA_03139	0.85	-3.8
3,290,055	-		CCNA_03139	0.86	-3.8
3,290,072	-		CCNA_03139	0.86	-1.3
3,290,094	-		CCNA_03139	0.88	-4.3
3,290,096	+		CCNA_03139	0.88	-1.5
3,290,104	-		CCNA_03139	0.88	-2.5
3,290,104	-		CCNA_03139	0.88	-6.3
3,290,104	-		CCNA_03139	0.88	-4.2
3,290,104	-		CCNA_03139	0.88	-4.3
3,290,104	-		CCNA_03139	0.88	-4.4
3,290,117	+		CCNA_03139	0.89	-4.5
3,290,125	-		CCNA_03139	0.89	+0.9
3,290,127	+		CCNA_03139	0.89	-1.2
3,290,160	-				-4.4
3,290,188	-				-3.7
3,290,232	-				-3.4
3,290,287	+				-4.9
3,290,292	+				-4.3
3,290,300	-				-4.6
3,290,348	+				-1.2
3,290,462	+				+0.2
3,290,471	-				-0.5
3,290,500	+				+0.5
3,290,559	-		CCNA_03140	0.15	-1.3
3,290,581	+		CCNA_03140	0.18	+0.1
3,290,662	+		CCNA_03140	0.27	-0.2
3,290,662	+		CCNA_03140	0.27	+0.1
3,290,711	+		CCNA_03140	0.33	+0.8
3,290,721	+		CCNA_03140	0.34	+0.5
3,290,727	-		CCNA_03140	0.34	-0.9
3,290,729	-		CCNA_03140	0.35	+0.1
3,290,758	+		CCNA_03140	0.38	+0.2
3,290,816	+		CCNA_03140	0.44	+0.2
3,290,889	+		CCNA_03140	0.53	+0.4
3,290,889	+		CCNA_03140	0.53	-0.3
3,290,897	-		CCNA_03140	0.53	+0.7
3,290,897	-		CCNA_03140	0.53	-1.8
3,291,047	-		CCNA_03140	0.70	-0.8
3,291,071	+		CCNA_03140	0.73	-0.2
3,291,072	+		CCNA_03140	0.73	+0.1
3,291,129	+		CCNA_03140	0.79	+1.4
3,291,139	-		CCNA_03140	0.81	+0.0
3,291,175	+		CCNA_03140	0.85	+0.5
3,291,175	+		CCNA_03140	0.85	-0.1
3,291,183	-		CCNA_03140	0.86	-1.0
3,291,221	-		CCNA_03140	0.90	-0.7
3,291,225	+				-0.9
3,291,260	+				+0.6
3,291,293	-				+0.0
3,291,300	+				-0.3
3,291,300	+				-0.5