Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34615

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,375,790	-				+0.5
3,376,060	+				-3.0
3,376,060	+				-1.0
3,376,281	+				+1.0
3,376,281	+				+0.6
3,376,281	+				+1.0
3,376,282	-				+0.8
3,376,384	+				-0.2
3,376,516	+				+2.5
3,376,963	+				-0.6
3,377,025	+				-0.3
3,377,025	+				-0.8
3,377,040	+				+0.4
3,377,040	+				+0.8
3,377,040	+				-0.6
3,377,074	-				-0.1
3,377,142	+				-2.3
3,377,142	+				-0.8
3,377,193	-				-0.9
3,377,243	-				+0.5
3,377,357	-		BPHYT_RS34620	0.14	-0.8
3,377,503	+		BPHYT_RS34620	0.67	-2.0
3,377,592	-				+1.1
3,377,592	-				-0.4
3,377,611	+				-0.8
3,377,611	+				-0.2
3,377,612	-				+1.4
3,377,877	-		BPHYT_RS34625	0.67	-0.3
3,377,912	+		BPHYT_RS34625	0.77	+0.1
3,377,929	+		BPHYT_RS34625	0.82	+1.5
3,377,930	-		BPHYT_RS34625	0.82	-0.6