Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS34580 and BPHYT_RS34585 overlap by 4 nucleotides BPHYT_RS34585 and BPHYT_RS34590 are separated by 224 nucleotides BPHYT_RS34590 and BPHYT_RS34595 are separated by 26 nucleotides
BPHYT_RS34580: BPHYT_RS34580 - DNA alkylation repair protein, at 3,366,227 to 3,366,928
_RS34580
BPHYT_RS34585: BPHYT_RS34585 - hypothetical protein, at 3,366,925 to 3,367,332
_RS34585
BPHYT_RS34590: BPHYT_RS34590 - multidrug transporter, at 3,367,557 to 3,368,966
_RS34590
BPHYT_RS34595: BPHYT_RS34595 - multidrug transporter, at 3,368,993 to 3,372,187
_RS34595
Position (kb) 3367
3368
3369 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 3366.691 kb on - strand, within BPHYT_RS34580 at 3366.720 kb on - strand, within BPHYT_RS34580 at 3366.720 kb on - strand, within BPHYT_RS34580 at 3366.841 kb on + strand, within BPHYT_RS34580 at 3366.842 kb on - strand, within BPHYT_RS34580 at 3366.843 kb on + strand, within BPHYT_RS34580 at 3366.843 kb on + strand, within BPHYT_RS34580 at 3367.050 kb on - strand, within BPHYT_RS34585 at 3367.110 kb on + strand, within BPHYT_RS34585 at 3367.111 kb on - strand, within BPHYT_RS34585 at 3367.175 kb on + strand, within BPHYT_RS34585 at 3367.176 kb on - strand, within BPHYT_RS34585 at 3367.176 kb on - strand, within BPHYT_RS34585 at 3367.180 kb on - strand, within BPHYT_RS34585 at 3367.180 kb on - strand, within BPHYT_RS34585 at 3367.729 kb on + strand, within BPHYT_RS34590 at 3367.730 kb on - strand, within BPHYT_RS34590 at 3367.730 kb on - strand, within BPHYT_RS34590 at 3367.753 kb on + strand, within BPHYT_RS34590 at 3367.783 kb on + strand, within BPHYT_RS34590 at 3367.784 kb on - strand, within BPHYT_RS34590 at 3368.381 kb on + strand, within BPHYT_RS34590 at 3368.494 kb on + strand, within BPHYT_RS34590 at 3368.586 kb on - strand, within BPHYT_RS34590 at 3368.668 kb on + strand, within BPHYT_RS34590 at 3368.918 kb on - strand at 3369.354 kb on + strand, within BPHYT_RS34595 at 3369.354 kb on + strand, within BPHYT_RS34595 at 3369.456 kb on + strand, within BPHYT_RS34595 at 3369.507 kb on + strand, within BPHYT_RS34595 at 3369.507 kb on + strand, within BPHYT_RS34595 at 3369.507 kb on + strand, within BPHYT_RS34595 at 3369.508 kb on - strand, within BPHYT_RS34595 at 3369.541 kb on - strand, within BPHYT_RS34595 at 3369.800 kb on - strand, within BPHYT_RS34595 at 3369.800 kb on - strand, within BPHYT_RS34595 at 3369.800 kb on - strand, within BPHYT_RS34595 at 3369.803 kb on - strand, within BPHYT_RS34595 at 3369.834 kb on + strand, within BPHYT_RS34595 at 3369.835 kb on - strand, within BPHYT_RS34595 at 3369.835 kb on - strand, within BPHYT_RS34595 at 3369.888 kb on + strand, within BPHYT_RS34595 at 3369.888 kb on + strand, within BPHYT_RS34595 at 3369.931 kb on - strand, within BPHYT_RS34595
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 3,366,691 - BPHYT_RS34580 0.66 -1.5 3,366,720 - BPHYT_RS34580 0.70 +0.3 3,366,720 - BPHYT_RS34580 0.70 +0.3 3,366,841 + BPHYT_RS34580 0.87 -0.4 3,366,842 - BPHYT_RS34580 0.88 +0.0 3,366,843 + BPHYT_RS34580 0.88 +1.3 3,366,843 + BPHYT_RS34580 0.88 +2.3 3,367,050 - BPHYT_RS34585 0.31 +3.1 3,367,110 + BPHYT_RS34585 0.45 -0.2 3,367,111 - BPHYT_RS34585 0.46 +1.5 3,367,175 + BPHYT_RS34585 0.61 +1.5 3,367,176 - BPHYT_RS34585 0.62 -1.8 3,367,176 - BPHYT_RS34585 0.62 +3.1 3,367,180 - BPHYT_RS34585 0.62 +0.3 3,367,180 - BPHYT_RS34585 0.62 +0.1 3,367,729 + BPHYT_RS34590 0.12 -1.1 3,367,730 - BPHYT_RS34590 0.12 -0.7 3,367,730 - BPHYT_RS34590 0.12 -0.3 3,367,753 + BPHYT_RS34590 0.14 +1.0 3,367,783 + BPHYT_RS34590 0.16 +0.9 3,367,784 - BPHYT_RS34590 0.16 +0.6 3,368,381 + BPHYT_RS34590 0.58 -4.4 3,368,494 + BPHYT_RS34590 0.66 +0.2 3,368,586 - BPHYT_RS34590 0.73 -0.2 3,368,668 + BPHYT_RS34590 0.79 +0.2 3,368,918 - -2.6 3,369,354 + BPHYT_RS34595 0.11 -0.3 3,369,354 + BPHYT_RS34595 0.11 -0.2 3,369,456 + BPHYT_RS34595 0.14 +0.3 3,369,507 + BPHYT_RS34595 0.16 -3.0 3,369,507 + BPHYT_RS34595 0.16 -1.3 3,369,507 + BPHYT_RS34595 0.16 -0.9 3,369,508 - BPHYT_RS34595 0.16 +0.2 3,369,541 - BPHYT_RS34595 0.17 -2.5 3,369,800 - BPHYT_RS34595 0.25 -0.1 3,369,800 - BPHYT_RS34595 0.25 -1.1 3,369,800 - BPHYT_RS34595 0.25 -0.6 3,369,803 - BPHYT_RS34595 0.25 +0.1 3,369,834 + BPHYT_RS34595 0.26 -3.8 3,369,835 - BPHYT_RS34595 0.26 +1.3 3,369,835 - BPHYT_RS34595 0.26 -1.0 3,369,888 + BPHYT_RS34595 0.28 +1.5 3,369,888 + BPHYT_RS34595 0.28 -2.2 3,369,931 - BPHYT_RS34595 0.29 +1.0
Or see this region's nucleotide sequence