Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33485

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxyadenosine 5-monophosphate 5 mM (C)
3,096,941	+		BPHYT_RS33475	0.70	+1.0
3,096,941	+		BPHYT_RS33475	0.70	-0.4
3,096,941	+		BPHYT_RS33475	0.70	-0.0
3,096,941	+		BPHYT_RS33475	0.70	-2.2
3,096,941	+		BPHYT_RS33475	0.70	-0.9
3,096,942	-		BPHYT_RS33475	0.70	+1.0
3,096,986	+		BPHYT_RS33475	0.77	+1.3
3,096,987	-		BPHYT_RS33475	0.77	+0.4
3,096,987	-		BPHYT_RS33475	0.77	+2.2
3,097,034	+		BPHYT_RS33475	0.84	+0.1
3,097,263	+				+0.5
3,097,264	-				+0.3
3,097,927	+				-0.3
3,097,947	+				-0.8
3,097,948	-				+2.1
3,097,948	-				-0.3
3,097,948	-				+4.1
3,097,948	-				+0.1
3,097,957	+		BPHYT_RS33485	0.11	+1.2
3,097,957	+		BPHYT_RS33485	0.11	-0.1
3,097,958	-		BPHYT_RS33485	0.11	-2.3
3,097,967	-		BPHYT_RS33485	0.15	+0.4
3,097,967	-		BPHYT_RS33485	0.15	+2.5
3,098,072	-		BPHYT_RS33485	0.62	-0.5
3,098,235	+				+1.1
3,098,236	-				+1.5
3,098,236	-				+0.8
3,098,271	-				-0.6
3,098,387	-				+0.5
3,098,514	+		BPHYT_RS33490	0.14	+0.3
3,098,515	-		BPHYT_RS33490	0.14	+0.8
3,098,515	-		BPHYT_RS33490	0.14	+1.1
3,098,536	+		BPHYT_RS33490	0.16	-0.9
3,098,536	+		BPHYT_RS33490	0.16	+0.4
3,098,707	+		BPHYT_RS33490	0.26	-0.0
3,098,821	+		BPHYT_RS33490	0.33	+0.6
3,098,915	-		BPHYT_RS33490	0.39	-0.5